RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
UBC-208ENST00000540700 ZNF318Q5VUA4 2279 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 A0A1B0GUA9 196 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 C9IYK1 514 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 SMC2O95347 1197 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 PIGRP01833 764 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
UBC-208ENST00000540700 MORC3Q14149 939 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.52
UBC-208ENST00000540700 ATF7IP2Q5U623 682 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 NELFCDQ8IXH7 590 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 CRIPAKQ8N1N5 446 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 TOP1MTQ969P6 601 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 CCDC34Q96HJ3 373 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 MRPL4Q9BYD3 311 aaKnown RBP18.29■□□□□ 0.52
UBC-208ENST00000540700 KCNG1Q9UIX4 513 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 HOOK1Q9UJC3 728 aaKnown RBP18.29■□□□□ 0.52
UBC-208ENST00000540700 MAPK8IP1Q9UQF2 711 aa18.29■□□□□ 0.52
UBC-208ENST00000540700 MICAL3Q7RTP6 2002 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 MEIS3P2A8K0S8 358 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 H0YCG3 227 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
UBC-208ENST00000540700 TGFB1I1O43294 461 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 CD44P16070 742 aaKnown RBP18.28■□□□□ 0.52
UBC-208ENST00000540700 CTNNB1P35222 781 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 LTBRP36941 435 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 STRN3Q13033 797 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 PSMD2Q13200 908 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 COL19A1Q14993 1142 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
UBC-208ENST00000540700 SMG8Q8ND04 991 aaKnown RBP18.28■□□□□ 0.52
UBC-208ENST00000540700 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 HVCN1Q96D96 273 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 FTHL17Q9BXU8 183 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 CDT1Q9H211 546 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 CHST12Q9NRB3 414 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 TNFSF13BQ9Y275 285 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 PCDHB13Q9Y5F0 798 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
UBC-208ENST00000540700 NPTXRO95502 500 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 ADSSP30520 456 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 AXLP30530 894 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 FAM189BP81408 668 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 DLX2Q07687 328 aaPredicted RBP18.27■□□□□ 0.52
UBC-208ENST00000540700 ALCAMQ13740 583 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 CCDC183Q5T5S1 534 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 ZNF658Q5TYW1 1059 aaPredicted RBP18.27■□□□□ 0.52
UBC-208ENST00000540700 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
UBC-208ENST00000540700 NOTUMQ6P988 496 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 CEP120Q8N960 986 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 ACCSQ96QU6 501 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 KCTD10Q9H3F6 313 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 IGFLR1Q9H665 355 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 RNF19AQ9NV58 838 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 RMND1Q9NWS8 449 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 HES2Q9Y543 173 aa18.27■□□□□ 0.52
UBC-208ENST00000540700 ZFHX2Q9C0A1 2572 aaPredicted RBP18.27■□□□□ 0.51
UBC-208ENST00000540700 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
UBC-208ENST00000540700 IBSPP21815 317 aaPredicted RBP18.26■□□□□ 0.51
UBC-208ENST00000540700 PRCPP42785 496 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 ZBTB41Q5SVQ8 909 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 ZPBP2Q6X784 338 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 ZNF598Q86UK7 904 aaKnown RBP18.26■□□□□ 0.51
UBC-208ENST00000540700 ECHDC2Q86YB7 292 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 RNF135Q8IUD6 432 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 LPPQ93052 612 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 TRAIPQ9BWF2 469 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 CXCL16Q9H2A7 254 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 NXF3Q9H4D5 531 aaKnown RBP18.26■□□□□ 0.51
UBC-208ENST00000540700 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
UBC-208ENST00000540700 UBE4BO95155 1302 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 A0A0U1RQF3 1178 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 PPP1R3GB7ZBB8 358 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 HNRNPDLO14979 420 aaKnown RBP18.25■□□□□ 0.51
UBC-208ENST00000540700 N4BP3O15049 544 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 GRM6O15303 877 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 MBTPS2O43462 519 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 NCK2O43639 380 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 FAM189A1O60320 539 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 TOM1L1O75674 476 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
UBC-208ENST00000540700 SCP2P22307 547 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 GTF2F1P35269 517 aaKnown RBP eCLIP18.25■□□□□ 0.519e-7■■□□□ 13.9
UBC-208ENST00000540700 GATMP50440 423 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 MCL1Q07820 350 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 HYAL1Q12794 435 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 SMAD2Q15796 467 aaKnown RBP18.25■□□□□ 0.51
UBC-208ENST00000540700 SEZ6Q53EL9 994 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 COBLL1Q53SF7 1204 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 SLC27A1Q6PCB7 646 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 MPZL3Q6UWV2 235 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 SLC24A5Q71RS6 500 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 FIBCD1Q8N539 461 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
UBC-208ENST00000540700 CCDC51Q96ER9 411 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 BICD1Q96G01 975 aa18.25■□□□□ 0.51
UBC-208ENST00000540700 POP1Q99575 1024 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms