RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ANKRD33BA6NCL7 494 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 NVLO15381 856 aaKnown RBP9.29□□□□□ -0.92
DDB1-217ENST00000540166 PLCG1P19174 1290 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 VWA3BQ502W6 1294 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 TCERG1LQ5VWI1 586 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 KCTD1Q719H9 257 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 SYCE1Q8N0S2 351 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 PXYLP1Q8TE99 480 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 ACAD9Q9H845 621 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 RHBDL2Q9NX52 303 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 PCDHA4Q9UN74 947 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 ASB14A6NK59 587 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 WNT7AO00755 349 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 MAP3K7O43318 606 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 GSTA2P09210 222 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 SYN1P17600 705 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 PMS2P54278 862 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 PPP2R5EQ16537 467 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 MAN2A1Q16706 1144 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 CATSPERGQ6ZRH7 1159 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 RBM41Q96IZ5 413 aaKnown RBP9.29□□□□□ -0.92
DDB1-217ENST00000540166 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
DDB1-217ENST00000540166 HNRNPCP07910 306 aaKnown RBP eCLIP9.29□□□□□ -0.929e-7■□□□□ 8.9
DDB1-217ENST00000540166 GNA11P29992 359 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 NONOQ15233 471 aaKnown RBP eCLIP9.29□□□□□ -0.92
DDB1-217ENST00000540166 TRADDQ15628 312 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
DDB1-217ENST00000540166 CFAP157Q5JU67 520 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 KLHDC7AQ5VTJ3 777 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 KRT79Q5XKE5 535 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 MTMR8Q96EF0 704 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 UIMC1Q96RL1 719 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
DDB1-217ENST00000540166 STARD7Q9NQZ5 370 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 TBC1D7Q9P0N9 293 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 SLC12A6Q9UHW9 1150 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 AMFRQ9UKV5 643 aa9.29□□□□□ -0.92
DDB1-217ENST00000540166 C5orf60A6NFR6 353 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 SERPING1P05155 500 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 KRT16P08779 473 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 MYCLP12524 364 aaPredicted RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 TMED1Q13445 227 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 ANKRD40Q6AI12 368 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 HS2ST1Q7LGA3 356 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 ADGRA1Q86SQ6 560 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 PIGOQ8TEQ8 1089 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 HPS3Q969F9 1004 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 PITPNM3Q9BZ71 974 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 XPNPEP3Q9NQH7 507 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 ARHGAP20Q9P2F6 1191 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 CNOT8Q9UFF9 292 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 PARP2Q9UGN5 583 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 TRIOBPQ9H2D6 2365 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 NOP56O00567 594 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 TTI1O43156 1089 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 CFBP00751 764 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 OR52Z1P0C646 297 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 LINGO3P0C6S8 592 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 ABCD1P33897 745 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 CDK17Q00537 523 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 DEUP1Q05D60 604 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 TROAPQ12815 778 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 BICD1Q96G01 975 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 HIC2Q96JB3 615 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 FRMPD2Q68DX3 1309 aaPredicted RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 AGTP01019 485 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 DSG3P32926 999 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 ADCY1Q08828 1119 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 SEC23AQ15436 765 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDB1-217ENST00000540166 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 AGGF1Q8N302 714 aaeCLIP9.28□□□□□ -0.92
DDB1-217ENST00000540166 PCSK9Q8NBP7 692 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 HAUS1Q96CS2 278 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 DYDC2Q96IM9 177 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.924e-7■■□□□ 13.3
DDB1-217ENST00000540166 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 TMX2Q9Y320 296 aa9.28□□□□□ -0.92
DDB1-217ENST00000540166 NOC2LQ9Y3T9 749 aaKnown RBP9.28□□□□□ -0.92
DDB1-217ENST00000540166 SNED1Q8TER0 1413 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 A0A1W2PQJ5 194 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 SMCO2A6NFE2 343 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 A8MUI8 341 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 RNF8O76064 485 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 PGK2P07205 417 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 CALB2P22676 271 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 NCALDP61601 193 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 DR1Q01658 176 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 LRRC41Q15345 812 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms