RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ITGA4P13612 1032 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 GRM5P41594 1212 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 EPHB4P54760 987 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 TTI2Q6NXR4 508 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 CSGALNACT2Q8N6G5 542 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 RNF169Q8NCN4 708 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 HERVK_113Q902F9 699 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 SAAL1Q96ER3 474 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 FAM213AQ9BRX8 229 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 ELAC1Q9H777 363 aaKnown RBP16.81■□□□□ 0.28
DDB1-216ENST00000539739 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 PARP2Q9UGN5 583 aa16.81■□□□□ 0.28
DDB1-216ENST00000539739 CLTAP09496 248 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 ZNF445P59923 1031 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 OSTNP61366 133 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 CEP135Q66GS9 1140 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 ENOX1Q8TC92 643 aaKnown RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 APOL6Q9BWW8 343 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
DDB1-216ENST00000539739 TMEM161AQ9NX61 479 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 HES2Q9Y543 173 aa16.8■□□□□ 0.28
DDB1-216ENST00000539739 GOLGA8IPA6NC78 632 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 GOLGA8JA6NMD2 632 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 ACOT2P49753 483 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 ZNF165P49910 485 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 POU5F1Q01860 360 aaKnown RBP16.79■□□□□ 0.28
DDB1-216ENST00000539739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.79■□□□□ 0.283e-18■■■■□ 24.6
DDB1-216ENST00000539739 NPAS4Q8IUM7 802 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 CEP120Q8N960 986 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 DUSP9Q99956 384 aaKnown RBP16.79■□□□□ 0.28
DDB1-216ENST00000539739 BPIFA3Q9BQP9 254 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 UBE2OQ9C0C9 1292 aaKnown RBP16.79■□□□□ 0.28
DDB1-216ENST00000539739 CPSF3Q9UKF6 684 aaKnown RBP16.79■□□□□ 0.28
DDB1-216ENST00000539739 CEP290O15078 2479 aa16.79■□□□□ 0.28
DDB1-216ENST00000539739 HOXA2O43364 376 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 FAM189A1O60320 539 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SEZ6Q53EL9 994 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SPATA1Q5VX52 437 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 RDH13Q8NBN7 331 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 FBXL18Q96ME1 805 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SRRTQ9BXP5 876 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SLC4A7Q9Y6M7 1214 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 BECN2A8MW95 431 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 RECQL4O94761 1208 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 ATF7P17544 494 aaPredicted RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 AKAP5P24588 427 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 PSMC2P35998 433 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 TNFSF9P41273 254 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 MYL5Q02045 173 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 FILIP1Q7Z7B0 1213 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
DDB1-216ENST00000539739 LPPQ93052 612 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 TOP1MTQ969P6 601 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 GDF15Q99988 308 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 RSAD1Q9HA92 442 aa16.78■□□□□ 0.28
DDB1-216ENST00000539739 MICAL3Q7RTP6 2002 aa16.77■□□□□ 0.28
DDB1-216ENST00000539739 FSD2A1L4K1 749 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 TULP1O00294 542 aaPredicted RBP16.77■□□□□ 0.27
DDB1-216ENST00000539739 MAPK13O15264 365 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.27
DDB1-216ENST00000539739 AKAP3O75969 853 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 UPP2O95045 317 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 GNA14O95837 355 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 DEFB103AP81534 67 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 ZBTB41Q5SVQ8 909 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.27
DDB1-216ENST00000539739 AGMOQ6ZNB7 445 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 CBWD2Q8IUF1 395 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 CD302Q8IX05 232 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 TMEM192Q8IY95 271 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 ABI1Q8IZP0 508 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 ZSWIM2Q8NEG5 633 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 ANP32BQ92688 251 aaKnown RBP16.77■□□□□ 0.27
DDB1-216ENST00000539739 FAM212AQ96EL1 285 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 EEF2KMTQ96G04 330 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 MED15Q96RN5 788 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.27
DDB1-216ENST00000539739 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.27
DDB1-216ENST00000539739 PDE4DIPQ5VU43 2346 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms