RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 AADACL2Q6P093 401 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 PPP1R21Q6ZMI0 780 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 NOP9Q86U38 636 aaKnown RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 CKAP2Q8WWK9 683 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 RSRC1Q96IZ7 334 aaKnown RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 C8orf37Q96NL8 207 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 PCDHB18PQ96TA0 734 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 CCDC77Q9BR77 488 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 BATF3Q9NR55 127 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 HSPBP1Q9NZL4 362 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 TMEM110-MUSTN1A8MSY1 372 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 ZBTB39O15060 712 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 ATP2C2O75185 946 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 SGPL1O95470 568 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 GH2P01242 217 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 GCLMP48507 274 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 GPC3P51654 580 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 DLG4P78352 724 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 FMO1Q01740 532 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 CENPCQ03188 943 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 PTP4A2Q12974 167 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 BNIP1Q12981 228 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 KRT39Q6A163 491 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 ACAD10Q6JQN1 1059 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 FAM160B2Q86V87 743 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 PSPC1Q8WXF1 523 aaKnown RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 ZNF653Q96CK0 615 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 MXRA8Q9BRK3 442 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 TMEM117Q9H0C3 514 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 AVENQ9NQS1 362 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 WRAP73Q9P2S5 460 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 LGALS13Q9UHV8 139 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 SORBS3O60504 671 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 GDF11O95390 407 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 CYP11B1P15538 503 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 NQO1P15559 274 aaKnown RBP14.18□□□□□ -0.14
UBE3B-209ENST00000539584 MAP2K1Q02750 393 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-209ENST00000539584 KRT17Q04695 432 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 NR1H3Q13133 447 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 ACVR2BQ13705 512 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 C1orf220Q5T0J3 134 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 ZNF677Q86XU0 584 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 ATL2Q8NHH9 583 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 N4BP2L2Q92802 583 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-209ENST00000539584 ANKRD27Q96NW4 1050 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 CCDC113Q9H0I3 377 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 RXFP1Q9HBX9 757 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 TMEM8AQ9HCN3 771 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 BAIAP2L1Q9UHR4 511 aa14.18□□□□□ -0.14
UBE3B-209ENST00000539584 FAM196BA6NMK8 535 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 ZC3H11AO75152 810 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBE3B-209ENST00000539584 CDH16O75309 829 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 CCND1P24385 295 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 RBM5P52756 815 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBE3B-209ENST00000539584 COPS2P61201 443 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 STAT4Q14765 748 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 TLDC1Q6P9B6 456 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 MIER3Q7Z3K6 550 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 TMC2Q8TDI7 906 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 MAGEB18Q96M61 343 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 TRIM7Q9C029 511 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 ASIC3Q9UHC3 531 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 PTPN22Q9Y2R2 807 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 ADGRA3Q8IWK6 1321 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 NDC80O14777 642 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 ATP5HO75947 161 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 PDE6BP35913 854 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 SLCO1A2P46721 670 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 NCKAP1LP55160 1127 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 HAUS6Q7Z4H7 955 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 PPM1KQ8N3J5 372 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 LARGE2Q8N3Y3 721 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 MAB21L3Q8N8X9 362 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 CCDC89Q8N998 374 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 DHX38Q92620 1227 aaKnown RBP14.17□□□□□ -0.14
UBE3B-209ENST00000539584 NT5C1BQ96P26 610 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 CBWD1Q9BRT8 395 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 AAASQ9NRG9 546 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 PRKAG3Q9UGI9 489 aa14.17□□□□□ -0.14
UBE3B-209ENST00000539584 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-209ENST00000539584 RBBP6Q7Z6E9 1792 aaKnown RBP14.17□□□□□ -0.14
UBE3B-209ENST00000539584 A0A1W2PRG0 241 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 TCP11X1B4DZS4 312 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 CYP26A1O43174 497 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 ABHD2P08910 425 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 ARP10275 920 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 IFNAR2P48551 515 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 RARRES1P49788 294 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 SLC18A1P54219 525 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms