RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TRIM73Q86UV7 250 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 LEMD2Q8NC56 503 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GDF15Q99988 308 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SPOCK3Q9BQ16 436 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM62Q9BVG3 475 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRPV6Q9H1D0 765 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM60Q9H2L4 133 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 KBTBD4Q9NVX7 518 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SPG21Q9NZD8 308 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PCDHA7Q9UN72 937 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MYH6P13533 1939 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 POLR2DO15514 142 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CBFA2T2O43439 604 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MED24O75448 989 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF202O95125 648 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ALDH2P05091 517 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SRGAP2CP0DJJ0 459 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GHRP10912 638 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ERCC5P28715 1186 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MAGEA10P43363 369 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TOB1P50616 345 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 NCKAP1LP55160 1127 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PEX3P56589 373 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GTF2BQ00403 316 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GRB10Q13322 594 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRPC3Q13507 836 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM71Q2Q1W2 868 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SV2CQ496J9 727 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 NOMO2Q5JPE7 1267 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 WDR44Q5JSH3 913 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF618Q5T7W0 954 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 KIAA1841Q6NSI8 718 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 C1orf186Q6ZWK4 172 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ANO5Q75V66 913 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MAP4K3Q8IVH8 894 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 HERC6Q8IVU3 1022 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ELMOD1Q8N336 334 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 LINC01465Q8N7H1 131 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CYP2W1Q8TAV3 490 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 BADQ92934 168 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PCYT2Q99447 389 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 FZD8Q9H461 694 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CHCHD3Q9NX63 227 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 RGL1Q9NZL6 768 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TFIP11Q9UBB9 837 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ZMYND8Q9ULU4 1186 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PADI3Q9ULW8 664 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ST3GAL5Q9UNP4 418 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 COG5Q9UP83 839 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GINS2Q9Y248 185 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 C2CD2Q9Y426 696 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CLIC4Q9Y696 253 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CFAP69A5D8W1 941 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 BECN2A8MW95 431 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GOLGA6L19H0YKK7 550 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 INPPL1O15357 1258 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 EXTL3O43909 919 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PHACTR2O75167 634 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 URODP06132 367 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CTSHP09668 335 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM191BP0C7N4 346 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SPATA31C1P0DKV0 1188 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PFKFB1P16118 471 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 CLCN3P51790 818 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 FAM189BP81408 668 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MGAT3Q09327 533 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 STILQ15468 1287 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 STX1AQ16623 288 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 BMT2Q1RMZ1 405 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TSR1Q2NL82 804 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 FKBP15Q5T1M5 1219 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ENOSF1Q7L5Y1 443 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 DPH6Q7L8W6 267 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SLC9A9Q8IVB4 645 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 DCP1BQ8IZD4 617 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 GPD1LQ8N335 351 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 XXYLT1Q8NBI6 393 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TMC2Q8TDI7 906 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 C2orf15Q8WU43 125 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TMEM174Q8WUU8 243 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 DHX38Q92620 1227 aaKnown RBP3.88□□□□□ -1.79
PTPN22-211ENST00000538253 DDX12PQ92771 950 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ADAM2Q99965 735 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 SLX1AQ9BQ83 275 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 MSTO1Q9BUK6 570 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 TRIM9Q9C026 710 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 ARHGAP28Q9P2N2 729 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 PARP2Q9UGN5 583 aa3.88□□□□□ -1.79
PTPN22-211ENST00000538253 A0A087WZ62 844 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 MYADML2A6NDP7 307 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 EML1O00423 815 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 SYN3O14994 580 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 ZNF862O60290 1169 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PEX10O60683 326 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 RHOBTB3O94955 611 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 THP07101 528 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 CYP2C18P33260 490 aa3.87□□□□□ -1.79
PTPN22-211ENST00000538253 PSMC2P35998 433 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms