RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 DEF6Q9H4E7 631 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ST6GALNAC4Q9H4F1 302 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 C17orf75Q9HAS0 396 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TBX20Q9UMR3 447 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MACROD2A1Z1Q3 448 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ANKRD63C9JTQ0 380 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PDXKO00764 312 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NR3C1P04150 777 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TCP1P17987 556 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NAMPTP43490 491 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CASP4P49662 377 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CYP2J2P51589 502 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TMEM62Q0P6H9 643 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KCNA10Q16322 511 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CCDC40Q4G0X9 1142 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CCSAPQ6IQ19 270 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CBWD1Q9BRT8 395 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 NTPCRQ9BSD7 190 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 UNC93B1Q9H1C4 597 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ADAM21Q9UKJ8 722 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 AKT3Q9Y243 479 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CAPN6Q9Y6Q1 641 aa14.03□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TREHO43280 583 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SERPING1P05155 500 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ARHGEF6Q15052 776 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MTFR1Q15390 333 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 IER5Q5VY09 327 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LHX8Q68G74 356 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 STXBP4Q6ZWJ1 553 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 DEPTORQ8TB45 409 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 FAM71BQ8TC56 605 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 TCP11Q8WWU5 503 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ALS2CR12Q96Q35 445 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 ACCSQ96QU6 501 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 PCIF1Q9H4Z3 704 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MINDY3Q9H8M7 445 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 SPC25Q9HBM1 224 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 MED4Q9NPJ6 270 aa14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 CWC15Q9P013 229 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-202ENST00000536708 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GAS2O43903 313 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PRMT2P55345 433 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ADAM9Q13443 819 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 PPP2R5AQ15172 486 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NBPF20Q3BBV1 942 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SLC9C1Q4G0N8 1177 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CCNI2Q6ZMN8 369 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MTG1Q9BT17 334 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HMX1Q9NP08 348 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HYOU1Q9Y4L1 999 aa14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HNRNPDLO14979 420 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ZNF185O15231 689 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CALUO43852 315 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 AKAP3O75969 853 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ADSSP30520 456 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NKX3-2P78367 333 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ADAM17P78536 824 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ALCAMQ13740 583 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 SFMBT2Q5VUG0 894 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CDCA2Q69YH5 1023 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KIAA0319LQ8IZA0 1049 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CAPZA3Q96KX2 299 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 KATNAL1Q9BW62 490 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 RNF14Q9UBS8 474 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 ANK1P16157 1881 aa14.01□□□□□ -0.17
CDK5RAP3-202ENST00000536708 A0A087WZ62 844 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MBLAC1A4D2B0 266 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 VGLL3A8MV65 326 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CETN3O15182 167 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MAGEB2O15479 319 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MOCS3O95396 460 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 IQCF3P0C7M6 154 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CYP2C9P11712 490 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 CST5P28325 142 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HOXC8P31273 242 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 LMAN1P49257 510 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 MXD4Q14582 209 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 FAM47CQ5HY64 1035 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 HS2ST1Q7LGA3 356 aa14□□□□□ -0.17
CDK5RAP3-202ENST00000536708 FRMD5Q7Z6J6 570 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms