RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZFR2Q9UPR6 939 aaKnown RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 ITSN1Q15811 1721 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 TOPAZ1Q8N9V7 1692 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 C2orf78A6NCI8 922 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 KDM1AO60341 852 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 VIL1P09327 827 aaKnown RBP7.36□□□□□ -1.23
CLIP1-207ENST00000536634 HNRNPLP14866 589 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLIP1-207ENST00000536634 ATP2C1P98194 919 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-207ENST00000536634 GPR135Q8IZ08 494 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 FUKQ8N0W3 1084 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 Q8TCH9 128 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 FERMT2Q96AC1 680 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 WDR92Q96MX6 357 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 PLA2G12BQ9BX93 195 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 FAM126AQ9BYI3 521 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-207ENST00000536634 PPP2R3BQ9Y5P8 575 aa7.36□□□□□ -1.23
CLIP1-207ENST00000536634 CPDO75976 1380 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 EIF3AQ14152 1382 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 MYPNQ86TC9 1320 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 PRSS38A1L453 326 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 PFKMP08237 780 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 CLEC2LP0C7M8 214 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 ZNF585AQ6P3V2 769 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 FRMD7Q6ZUT3 714 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 KRT26Q7Z3Y9 468 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 CLRN3Q8NCR9 226 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 CHST13Q8NET6 341 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 GFM2Q969S9 779 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 OR14A2Q96R54 314 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 NOL10Q9BSC4 688 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 AGO3Q9H9G7 860 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 THRAP3Q9Y2W1 955 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 RBM8AQ9Y5S9 174 aaKnown RBP7.35□□□□□ -1.23
CLIP1-207ENST00000536634 AKAP12Q02952 1782 aa7.35□□□□□ -1.23
CLIP1-207ENST00000536634 PAPPAQ13219 1627 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ZEB2O60315 1214 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ZNF623O75123 536 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 H2AFYO75367 372 aaKnown RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ADRB1P08588 477 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ZNF20P17024 532 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 SESN2P58004 480 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 HDGFL2Q7Z4V5 671 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 CLEC14AQ86T13 490 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 SLC7A6OSQ96CW6 309 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ANO3Q9BYT9 981 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 APOBEC2Q9Y235 224 aaKnown RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 NOC2LQ9Y3T9 749 aaKnown RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 ARHGEF28Q8N1W1 1705 aaKnown RBP7.34□□□□□ -1.23
CLIP1-207ENST00000536634 CRB1P82279 1406 aa7.34□□□□□ -1.23
CLIP1-207ENST00000536634 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 USP19O94966 1318 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 ST20-MTHFSA0A0A6YYL1 179 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 SLC26A4O43511 780 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 RAB11FIP3O75154 756 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 RAD17O75943 681 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 EYA4O95677 639 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 POU3F3P20264 500 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 CNGA1P29973 690 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 ADCY7P51828 1080 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 MANFP55145 182 aaKnown RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 ADAM8P78325 824 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 PDCD1Q15116 288 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 SLC15A2Q16348 729 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 TXNRD1Q16881 649 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 CT47A1Q5JQC4 288 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 RASSF3Q86WH2 238 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 LYSMD2Q8IV50 215 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 GCDHQ92947 438 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 STK32BQ9NY57 414 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 TMPRSS11EQ9UL52 423 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 USP18Q9UMW8 372 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 JAG2Q9Y219 1238 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 PCDHB6Q9Y5E3 794 aa7.33□□□□□ -1.24
CLIP1-207ENST00000536634 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-207ENST00000536634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-207ENST00000536634 BPIFB4P59827 614 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 TCIRG1Q13488 830 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 STAT4Q14765 748 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 CDSNQ15517 529 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 SHCBP1Q8NEM2 672 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 DVL3Q92997 716 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-207ENST00000536634 MPHOSPH9Q99550 1183 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 C1QTNF3Q9BXJ4 246 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 KLC2Q9H0B6 622 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 SLC6A15Q9H2J7 730 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 SYNPO2Q9UMS6 1093 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 PRKAB1Q9Y478 270 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 SLC30A1Q9Y6M5 507 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 COL18A1P39060 1754 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 BCL9O00512 1426 aa7.32□□□□□ -1.24
CLIP1-207ENST00000536634 ACEP12821 1306 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 SESN3P58005 492 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 RIN1Q13671 783 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 TRIM25Q14258 630 aaKnown RBP7.31□□□□□ -1.24
CLIP1-207ENST00000536634 GPR162Q16538 588 aa7.31□□□□□ -1.24
CLIP1-207ENST00000536634 CCDC62Q6P9F0 684 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms