RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 CDH22Q9UJ99 828 aa20.2■□□□□ 0.82
VPS51-215ENST00000534557 CCDC195A0A1B0GUA6 201 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 CCDC169A6NNP5 214 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 PRPHP41219 470 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 MCM2P49736 904 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
VPS51-215ENST00000534557 PDXDC1Q6P996 788 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 GSTCDQ8NEC7 633 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 CMASQ8NFW8 434 aaPredicted RBP20.19■□□□□ 0.82
VPS51-215ENST00000534557 RIN2Q8WYP3 895 aaPredicted RBP20.19■□□□□ 0.82
VPS51-215ENST00000534557 PIDD1Q9HB75 910 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 SNTG2Q9NY99 539 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 FNIP2Q9P278 1114 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
VPS51-215ENST00000534557 PCDHB6Q9Y5E3 794 aa20.19■□□□□ 0.82
VPS51-215ENST00000534557 ARID2Q68CP9 1835 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 PTPN5P54829 565 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 DMP1Q13316 513 aaPredicted RBP20.18■□□□□ 0.82
VPS51-215ENST00000534557 NBR1Q14596 966 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 ATF7IP2Q5U623 682 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 PALB2Q86YC2 1186 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 RNF168Q8IYW5 571 aaPredicted RBP20.18■□□□□ 0.82
VPS51-215ENST00000534557 KCTD17Q8N5Z5 321 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
VPS51-215ENST00000534557 MUC6Q6W4X9 2439 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 RECQL4O94761 1208 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 NUBP1P53384 320 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
VPS51-215ENST00000534557 NHLH1Q02575 133 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 BSNDQ8WZ55 320 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 ASIC4Q96FT7 647 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 TIPINQ9BVW5 301 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 RHOBTB2Q9BYZ6 727 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 GPR62Q9BZJ7 368 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 MFSD1Q9H3U5 465 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 C17orf75Q9HAS0 396 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
VPS51-215ENST00000534557 CASTOR2A6NHX0 329 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 EFEMP2O95967 443 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 TOB1P50616 345 aaPredicted RBP20.16■□□□□ 0.82
VPS51-215ENST00000534557 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
VPS51-215ENST00000534557 ECM1Q16610 540 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 ALYREFQ86V81 257 aaKnown RBP20.16■□□□□ 0.82
VPS51-215ENST00000534557 CEP57Q86XR8 500 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 SMG7Q92540 1137 aaKnown RBP20.16■□□□□ 0.82
VPS51-215ENST00000534557 CDK5RAP3Q96JB5 506 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 TCHPQ9BT92 498 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 TTPALQ9BTX7 342 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 CCDC113Q9H0I3 377 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 NT5C3AQ9H0P0 336 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 TOPORSQ9NS56 1045 aaPredicted RBP20.16■□□□□ 0.82
VPS51-215ENST00000534557 TECTAO75443 2155 aa20.16■□□□□ 0.82
VPS51-215ENST00000534557 TRAPPC3O43617 180 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 BRD1O95696 1058 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 AVPR2P30518 371 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 GBP2P32456 591 aaPredicted RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 SMTNP53814 917 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 PEX3P56589 373 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 FAM171A1Q5VUB5 890 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 CCDC94Q9BW85 323 aaPredicted RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 MRPL4Q9BYD3 311 aaKnown RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 WDR6Q9NNW5 1121 aaKnown RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 KMT5AQ9NQR1 393 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 ZDHHC7Q9NXF8 308 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 IGSF9Q9P2J2 1179 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 TNFSF13BQ9Y275 285 aa20.15■□□□□ 0.82
VPS51-215ENST00000534557 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.15■□□□□ 0.82
VPS51-215ENST00000534557 E9PMD0 336 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 F8W810 466 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 TGM5O43548 720 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 ASGR2P07307 311 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 SPATA31D3P0C874 917 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 NPTX2P47972 431 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 TDGQ13569 410 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 SPATA31D4Q6ZUB0 917 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 GLYCTKQ8IVS8 523 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 RABGGTAQ92696 567 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 TMX3Q96JJ7 454 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 B3GALT6Q96L58 329 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 UROC1Q96N76 676 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 KIFC3Q9BVG8 833 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 POLD4Q9HCU8 107 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 SLC38A7Q9NVC3 462 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.14■□□□□ 0.81
VPS51-215ENST00000534557 SMC3Q9UQE7 1217 aa20.14■□□□□ 0.81
VPS51-215ENST00000534557 TTLL13PA6NNM8 815 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 HIP1RO75146 1068 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 B3GAT3O94766 335 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 STRN3Q13033 797 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 NT5DC1Q5TFE4 455 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 LIN9Q5TKA1 542 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 DCLRE1AQ6PJP8 1040 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 HASPINQ8TF76 798 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 NXPE3Q969Y0 559 aa20.13■□□□□ 0.81
VPS51-215ENST00000534557 PTGESO14684 152 aa20.12■□□□□ 0.81
VPS51-215ENST00000534557 MYBP10242 640 aa20.12■□□□□ 0.81
VPS51-215ENST00000534557 GJB2P29033 226 aa20.12■□□□□ 0.81
VPS51-215ENST00000534557 PSMD5Q16401 504 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms