RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 LARP1BQ659C4 914 aaKnown RBP14.75□□□□□ -0.05
CAPN1-228ENST00000534373 RINT1Q6NUQ1 792 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 FUT10Q6P4F1 479 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 HFE2Q6ZVN8 426 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 C1orf186Q6ZWK4 172 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 TAS1R1Q7RTX1 841 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 ZDHHC14Q8IZN3 488 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 C12orf76Q8N812 135 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-228ENST00000534373 CMASQ8NFW8 434 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-228ENST00000534373 AK8Q96MA6 479 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 SNTG2Q9NY99 539 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 KCND2Q9NZV8 630 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 TNFSF13BQ9Y275 285 aa14.75□□□□□ -0.05
CAPN1-228ENST00000534373 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 PP2D1A8MPX8 630 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 C2CD2LO14523 706 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 TEX28O15482 410 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 RECQL4O94761 1208 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 PAPLNO95428 1278 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 BMP15O95972 392 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 GUCY2CP25092 1073 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 CDC25AP30304 524 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 NPTX2P47972 431 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 PEX3P56589 373 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 DMP1Q13316 513 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-228ENST00000534373 HSP90AA2PQ14568 343 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-228ENST00000534373 NT5DC1Q5TFE4 455 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 GPR62Q9BZJ7 368 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 PLEKHA4Q9H4M7 779 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
CAPN1-228ENST00000534373 SF3B1O75533 1304 aaKnown RBP eCLIP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 TRIOO75962 3097 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 TMEM221A6NGB7 291 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 M0R296 226 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 PTGESO14684 152 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 HIP1RO75146 1068 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 GLUD1P00367 558 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 LIG1P18858 919 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 ELAVL2Q12926 359 aaKnown RBP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 NAB2Q15742 525 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 EEF1DP3Q658K8 133 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 TMC5Q6UXY8 1006 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 BRAPQ7Z569 592 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 UBALD2Q8IYN6 164 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 DAW1Q8N136 415 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 SYT2Q8N9I0 419 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 SPIRE2Q8WWL2 714 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 PBXIP1Q96AQ6 731 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 ACO2Q99798 780 aaKnown RBP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 KIFC3Q9BVG8 833 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 MRPL4Q9BYD3 311 aaKnown RBP14.73□□□□□ -0.05
CAPN1-228ENST00000534373 POLD4Q9HCU8 107 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 PTPRHQ9HD43 1115 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 KMT5AQ9NQR1 393 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 TSHZ2Q9NRE2 1034 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 SORCS3Q9UPU3 1222 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 TECTAO75443 2155 aa14.73□□□□□ -0.05
CAPN1-228ENST00000534373 VWA3AA6NCI4 1184 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 C2CD4DB7Z1M9 353 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 F8W810 466 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 EDN1P05305 212 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 SMTNP53814 917 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 MAPK7Q13164 816 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 KANK3Q6NY19 840 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 PDXDC1Q6P996 788 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 OTOP3Q7RTS5 596 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 KCNK18Q7Z418 384 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 ZBTB33Q86T24 672 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 TDRD5Q8NAT2 981 aaKnown RBP14.72□□□□□ -0.05
CAPN1-228ENST00000534373 CDK5RAP3Q96JB5 506 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 UROC1Q96N76 676 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 RUSC1Q9BVN2 902 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 MAN1C1Q9NR34 630 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 TOPORSQ9NS56 1045 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-228ENST00000534373 CDH22Q9UJ99 828 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 USP20Q9Y2K6 914 aa14.72□□□□□ -0.05
CAPN1-228ENST00000534373 CCDC195A0A1B0GUA6 201 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 TMEM189-UBE2V1I3L0A0 370 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 BRD1O95696 1058 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 WEE2P0C1S8 567 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PDCP20941 246 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 SCP2P22307 547 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 GRM5P41594 1212 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
CAPN1-228ENST00000534373 MTMR3Q13615 1198 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 CUL4AQ13619 759 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 LILRA6Q6PI73 481 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 ALKAL1Q6UXT8 129 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 KREMEN2Q8NCW0 462 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PIK3R5Q8WYR1 880 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 KCNN1Q92952 543 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PNMA5Q96PV4 448 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PPP1R10Q96QC0 940 aaKnown RBP14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PRRX2Q99811 253 aa14.71□□□□□ -0.05
CAPN1-228ENST00000534373 PAAF1Q9BRP4 392 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms