RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 SFNP31947 248 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 JAK3P52333 1124 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 NPEPPSP55786 919 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 PFKPQ01813 784 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 DMWDQ09019 674 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 MIER3Q7Z3K6 550 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
SVIP-205ENST00000533774 ING5Q8WYH8 240 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 TEKT3Q9BXF9 490 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 FAM126AQ9BYI3 521 aaPredicted RBP13.76□□□□□ -0.21
SVIP-205ENST00000533774 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
SVIP-205ENST00000533774 ANGPTL2Q9UKU9 493 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 LAMA1P25391 3075 aa13.76□□□□□ -0.21
SVIP-205ENST00000533774 KIF26AQ9ULI4 1882 aaPredicted RBP13.76□□□□□ -0.21
SVIP-205ENST00000533774 ZBTB43O43298 467 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 HRO43593 1189 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 C8AP07357 584 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 RETP07949 1114 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 HOXC13P31276 330 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 ADCY1Q08828 1119 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 SRSF5Q13243 272 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 NECTIN1Q15223 517 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 ZNF852Q6ZMS4 543 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 PRR23BQ6ZRT6 265 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 SRGAP1Q7Z6B7 1085 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 CELF5Q8N6W0 485 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 NELL2Q99435 816 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 COLEC11Q9BWP8 271 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 CHRDQ9H2X0 955 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 ADAM28Q9UKQ2 775 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 NDRG2Q9UN36 371 aaKnown RBP13.75□□□□□ -0.21
SVIP-205ENST00000533774 IGF2RP11717 2491 aa13.75□□□□□ -0.21
SVIP-205ENST00000533774 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 TM4SF5O14894 197 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 LRP3O75074 770 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
SVIP-205ENST00000533774 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
SVIP-205ENST00000533774 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 GAS6Q14393 721 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 CSRP2Q16527 193 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 SLC5A9Q2M3M2 681 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 TANGO2Q6ICL3 276 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
SVIP-205ENST00000533774 NXF3Q9H4D5 531 aaKnown RBP13.74□□□□□ -0.21
SVIP-205ENST00000533774 UBN1Q9NPG3 1134 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
SVIP-205ENST00000533774 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
SVIP-205ENST00000533774 RAB23Q9ULC3 237 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 POLIQ9UNA4 740 aa13.74□□□□□ -0.21
SVIP-205ENST00000533774 ANKRD11Q6UB99 2663 aaPredicted RBP13.73□□□□□ -0.21
SVIP-205ENST00000533774 EML1O00423 815 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 NCAM2O15394 837 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 TSPAN1O60635 241 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 ECI2O75521 394 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 AKAP5P24588 427 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 SHC2P98077 582 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 SATB1Q01826 763 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 MAMSTRQ6ZN01 415 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 HASPINQ8TF76 798 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 MCRS1Q96EZ8 462 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
SVIP-205ENST00000533774 RXFP3Q9NSD7 469 aa13.73□□□□□ -0.21
SVIP-205ENST00000533774 RYDENQ9NUL5 291 aaKnown RBP13.73□□□□□ -0.21
SVIP-205ENST00000533774 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 CHURC1-FNTBB4DL54 471 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 FCARP24071 287 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
SVIP-205ENST00000533774 HOXA9P31269 272 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 FNTBP49356 437 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
SVIP-205ENST00000533774 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 SLC7A14Q8TBB6 771 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 PIK3R5Q8WYR1 880 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
SVIP-205ENST00000533774 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
SVIP-205ENST00000533774 TDP2O95551 362 aa13.71□□□□□ -0.21
SVIP-205ENST00000533774 CEBPBP17676 345 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms