RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 NDUFV1P49821 464 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 DLX2Q07687 328 aaPredicted RBP16.86■□□□□ 0.29
CPSF1-210ENST00000532935 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
CPSF1-210ENST00000532935 ZNF568Q3ZCX4 644 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 HAUS6Q7Z4H7 955 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 MRPL43Q8N983 215 aaKnown RBP16.86■□□□□ 0.29
CPSF1-210ENST00000532935 KCNN1Q92952 543 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 VN1R3Q9BXE9 311 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 ZHX3Q9H4I2 956 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 MARCH5Q9NX47 278 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 C2orf71A6NGG8 1288 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 K7ENM7 598 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 ABLIM1O14639 778 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 PTGESO14684 152 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CUTAO60888 179 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 NR1I2O75469 434 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 BRD1O95696 1058 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CXCL14O95715 111 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 GLP2RO95838 553 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CTSAP10619 480 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 MCF2P10911 925 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CA8P35219 290 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 GRM5P41594 1212 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
CPSF1-210ENST00000532935 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
CPSF1-210ENST00000532935 PTCRAQ6ISU1 281 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-210ENST00000532935 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 ZPBP2Q6X784 338 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 ZBTB33Q86T24 672 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-210ENST00000532935 UHRF1Q96T88 793 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-210ENST00000532935 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
CPSF1-210ENST00000532935 MYMKA6NI61 221 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 TRAK2O60296 914 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 TOM1L1O75674 476 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 THP07101 528 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 SCP2P22307 547 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 TUSC3Q13454 348 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 BECN1Q14457 450 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 CLUL1Q15846 466 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 PDILTQ8N807 584 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 CEP120Q8N960 986 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 AUTS2Q8WXX7 1259 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 DDX12PQ92771 950 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 BICD1Q96G01 975 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 FIZ1Q96SL8 496 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
CPSF1-210ENST00000532935 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 CLEC1BQ9P126 229 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 ANKFY1Q9P2R3 1169 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 TBX20Q9UMR3 447 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
CPSF1-210ENST00000532935 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 GRXCR2A6NFK2 248 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 F8W810 466 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 HARSP12081 509 aaKnown RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 YARSP54577 528 aaKnown RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 OSTNP61366 133 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 NOLC1Q14978 699 aaKnown RBP eCLIP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 NAB2Q15742 525 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 SHC4Q6S5L8 630 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 MSLNLQ96KJ4 702 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 NECAB3Q96P71 396 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 TOPORSQ9NS56 1045 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 CACNG4Q9UBN1 327 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 CD207Q9UJ71 328 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 BARX2Q9UMQ3 279 aaPredicted RBP16.83■□□□□ 0.28
CPSF1-210ENST00000532935 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
CPSF1-210ENST00000532935 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 PLXNA3P51805 1871 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 CLDN3O15551 220 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 EFEMP2O95967 443 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 SOD2P04179 222 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 IL9P15248 144 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 NMT1P30419 496 aaKnown RBP16.82■□□□□ 0.28
CPSF1-210ENST00000532935 ABCD1P33897 745 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 ME1P48163 572 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 MCL1Q07820 350 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 KCNC3Q14003 757 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 RNF168Q8IYW5 571 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-210ENST00000532935 RABGGTAQ92696 567 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 PAAF1Q9BRP4 392 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 HERC2P3Q9BVR0 1158 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms