RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TNFRSF10AO00220 468 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 YEATS4O95619 227 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 SRGAP2BP0DMP2 458 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 CA8P35219 290 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 ZNF568Q3ZCX4 644 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 CCDC73Q6ZRK6 1079 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 MYCT1Q8N699 235 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 KCNN1Q92952 543 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 MSLNLQ96KJ4 702 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 NECAB3Q96P71 396 aaPredicted RBP25.21■■□□□ 1.63
CAPN1-222ENST00000532285 TCHPQ9BT92 498 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 COLEC11Q9BWP8 271 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 VN1R3Q9BXE9 311 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 CDT1Q9H211 546 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 CLEC1BQ9P126 229 aa25.21■■□□□ 1.63
CAPN1-222ENST00000532285 MUC3AQ02505 3323 aa25.2■■□□□ 1.63
CAPN1-222ENST00000532285 TBCAO75347 108 aaKnown RBP25.2■■□□□ 1.62
CAPN1-222ENST00000532285 THP07101 528 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 PROZP22891 400 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 COASYQ13057 564 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 KCNC3Q14003 757 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 CLUL1Q15846 466 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 ATL3Q6DD88 541 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 MPZL3Q6UWV2 235 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 TMEM184AQ6ZMB5 413 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 HAUS6Q7Z4H7 955 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 MARCH5Q9NX47 278 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 BDP1A6H8Y1 2624 aa25.2■■□□□ 1.62
CAPN1-222ENST00000532285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.19■■□□□ 1.62
CAPN1-222ENST00000532285 PTGESO14684 152 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 MCF2P10911 925 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 IL9P15248 144 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 GRM5P41594 1212 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 TUSC3Q13454 348 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 SMAD4Q13485 552 aaKnown RBP25.19■■□□□ 1.62
CAPN1-222ENST00000532285 ZPBP2Q6X784 338 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 SV2BQ7L1I2 683 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 ZBTB33Q86T24 672 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 TMEM87AQ8NBN3 555 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 VN1R2Q8NFZ6 395 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 CCDC94Q9BW85 323 aaPredicted RBP25.19■■□□□ 1.62
CAPN1-222ENST00000532285 BARX2Q9UMQ3 279 aaPredicted RBP25.19■■□□□ 1.62
CAPN1-222ENST00000532285 C5orf42Q9H799 3197 aa25.19■■□□□ 1.62
CAPN1-222ENST00000532285 MBTPS2O43462 519 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 TRAK2O60296 914 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 TOM1L1O75674 476 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 BRD1O95696 1058 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 SOD2P04179 222 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 YARSP54577 528 aaKnown RBP25.18■■□□□ 1.62
CAPN1-222ENST00000532285 PKP1Q13835 747 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 AUTS2Q8WXX7 1259 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 ZHX3Q9H4I2 956 aa25.18■■□□□ 1.62
CAPN1-222ENST00000532285 TOPORSQ9NS56 1045 aaPredicted RBP25.18■■□□□ 1.62
CAPN1-222ENST00000532285 ABLIM1O14639 778 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 CLASP2O75122 1294 aaKnown RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 ABCD1P33897 745 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 STAT6P42226 847 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 RBM10P98175 930 aaKnown RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 SMAD2Q15796 467 aaKnown RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 FOXD4L6Q3SYB3 417 aaPredicted RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 FOXD4L3Q6VB84 417 aaPredicted RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 FAM178BQ8IXR5 827 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 SMRP1Q8NCR6 262 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 ZBTB45Q96K62 511 aaPredicted RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 PANK2Q9BZ23 570 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 CXCL16Q9H2A7 254 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 MRPL17Q9NRX2 175 aaKnown RBP25.17■■□□□ 1.62
CAPN1-222ENST00000532285 SSX2IPQ9Y2D8 614 aa25.17■■□□□ 1.62
CAPN1-222ENST00000532285 K7ENM7 598 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 CUTAO60888 179 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 EFEMP2O95967 443 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 PDCD11Q14690 1871 aaKnown RBP25.16■■□□□ 1.62
CAPN1-222ENST00000532285 NOLC1Q14978 699 aaKnown RBP eCLIP25.16■■□□□ 1.62
CAPN1-222ENST00000532285 PTPN14Q15678 1187 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 NAB2Q15742 525 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 LLGL2Q6P1M3 1020 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 DYMQ7RTS9 669 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 CEP120Q8N960 986 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 KCNG4Q8TDN1 519 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 DDX12PQ92771 950 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 CASP10Q92851 521 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 BICD1Q96G01 975 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 ACAP3Q96P50 834 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 HERC2P3Q9BVR0 1158 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 PRKAG3Q9UGI9 489 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 ADAM28Q9UKQ2 775 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 CFAP45Q9UL16 551 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 TBX20Q9UMR3 447 aa25.16■■□□□ 1.62
CAPN1-222ENST00000532285 A0A087X0B3 334 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 F8W810 466 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 CLDN3O15551 220 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 OSTNP61366 133 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 HSP90AA2PQ14568 343 aaPredicted RBP25.15■■□□□ 1.62
CAPN1-222ENST00000532285 ALKAL1Q6UXT8 129 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 RNF168Q8IYW5 571 aaPredicted RBP25.15■■□□□ 1.62
CAPN1-222ENST00000532285 EMILIN2Q9BXX0 1053 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 ANKFY1Q9P2R3 1169 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 HCFC2Q9Y5Z7 792 aa25.15■■□□□ 1.62
CAPN1-222ENST00000532285 CASTOR2A6NHX0 329 aa25.14■■□□□ 1.62
CAPN1-222ENST00000532285 MYMKA6NI61 221 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms