RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SPTBN2O15020 2390 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 CEP250Q9BV73 2442 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 DOCK6Q96HP0 2047 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 CACNA1BQ00975 2339 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 NCAM2O15394 837 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 B4GALT5O43286 388 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 DTNBO60941 627 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 XYLBO75191 536 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 DEXIO95424 95 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 ARF4P18085 180 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 PSMA5P28066 241 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 PTENP60484 403 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 DSC1Q08554 894 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 PPP2R5CQ13362 524 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 HSP90AA2PQ14568 343 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 PSMD5Q16401 504 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 BMP2KLQ5H9B9 411 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 RTP2Q5QGT7 225 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 C4orf19Q8IY42 314 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 MAML2Q8IZL2 1156 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 CCDC51Q96ER9 411 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 PAAF1Q9BRP4 392 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 TTPALQ9BTX7 342 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 RHOBTB2Q9BYZ6 727 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 DLL3Q9NYJ7 618 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 VAV3Q9UKW4 847 aa10.26□□□□□ -0.77
NEDD8-206ENST00000531430 CDV3Q9UKY7 258 aaKnown RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 ZFP37Q9Y6Q3 630 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-206ENST00000531430 TPRP12270 2363 aaKnown RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 SDHBP21912 280 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 OR1D2P34982 312 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 PFKPQ01813 784 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 PRKCQQ04759 706 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 GRIK3Q13003 919 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 PPP4R3AQ6IN85 833 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 MOXD1Q6UVY6 613 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 PIK3AP1Q6ZUJ8 805 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 RNF168Q8IYW5 571 aaPredicted RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 LNX1Q8TBB1 728 aaPredicted RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 SLC7A14Q8TBB6 771 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 MBOAT7Q96N66 472 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 CLSTN3Q9BQT9 956 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 HCFC1R1Q9NWW0 138 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 FBXO4Q9UKT5 387 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 RAB23Q9ULC3 237 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 MRPS23Q9Y3D9 190 aaKnown RBP10.25□□□□□ -0.77
NEDD8-206ENST00000531430 PPME1Q9Y570 386 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 DOCK8Q8NF50 2099 aa10.25□□□□□ -0.77
NEDD8-206ENST00000531430 SF3B1O75533 1304 aaKnown RBP eCLIP10.25□□□□□ -0.774e-7■■■■■ 86.2
NEDD8-206ENST00000531430 OTOGLQ3ZCN5 2332 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 GPR179Q6PRD1 2367 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 LRRIQ4A6NIV6 560 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 ADAM12O43184 909 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 SLITRK3O94933 977 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 EFEMP2O95967 443 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 HNRNPA1P09651 372 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 HSPA4P34932 840 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 ARPP19P56211 112 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 MBTD1Q05BQ5 628 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 TUSC3Q13454 348 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 CAPSQ13938 189 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 ZNF528Q3MIS6 628 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 PABPC1LQ4VXU2 614 aaKnown RBP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 GALNT17Q6IS24 598 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 SLC27A1Q6PCB7 646 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 ZNF852Q6ZMS4 543 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 GSTCDQ8NEC7 633 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 NELL2Q99435 816 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 EIF2AK1Q9BQI3 630 aaKnown RBP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 HEBP1Q9NRV9 189 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 GJB4Q9NTQ9 266 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 SNTG2Q9NY99 539 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 FBXW11Q9UKB1 542 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 GMEB2Q9UKD1 530 aa10.24□□□□□ -0.77
NEDD8-206ENST00000531430 SMG5Q9UPR3 1016 aaKnown RBP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 TDRD15B5MCY1 1934 aaKnown RBP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 MTCL1Q9Y4B5 1905 aaKnown RBP10.24□□□□□ -0.77
NEDD8-206ENST00000531430 PRR5-ARHGAP8B1AHC4 643 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 M0R2N6 131 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 SPTLC1O15269 473 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 USO1O60763 962 aaKnown RBP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 KIF4AO95239 1232 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 C1RP00736 705 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 THP07101 528 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 XBP1P17861 261 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 GLRA2P23416 452 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 TARSP26639 723 aaKnown RBP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 ELF1P32519 619 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 ARL2P36404 184 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms