RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 POTEGQ6S5H5 508 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 PRSS55Q6UWB4 352 aaPredicted RBP20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 CYP26C1Q6V0L0 522 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 ST13P5Q8NFI4 369 aaPredicted RBP20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 RHOBTB2Q9BYZ6 727 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 NT5C3AQ9H0P0 336 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 CXCL16Q9H2A7 254 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 EPS15L1Q9UBC2 864 aa20.41■□□□□ 0.86
SSSCA1-206ENST00000531405 KRBA1A5PL33 1030 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 MED24O75448 989 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 TADA2AO75478 443 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 RTP2Q5QGT7 225 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 LILRA6Q6PI73 481 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 GET4Q7L5D6 327 aaPredicted RBP20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 CATSPER3Q86XQ3 398 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 CCDC105Q8IYK2 499 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 HDAC7Q8WUI4 952 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 PLEKHA4Q9H4M7 779 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 FNIP2Q9P278 1114 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 CA14Q9ULX7 337 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 USP20Q9Y2K6 914 aa20.4■□□□□ 0.86
SSSCA1-206ENST00000531405 FANCMQ8IYD8 2048 aa20.39■□□□□ 0.86
SSSCA1-206ENST00000531405 ZMYM2Q9UBW7 1377 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 STK25O00506 426 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 MCM7P33993 719 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 GUCY1B3Q02153 619 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 TRIM29Q14134 588 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 CDCA2Q69YH5 1023 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 SLC44A3Q8N4M1 653 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 DTWD2Q8NBA8 298 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 BSNDQ8WZ55 320 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 PRKD2Q9BZL6 878 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 PDZD7Q9H5P4 517 aa20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 PRMT7Q9NVM4 692 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-206ENST00000531405 CITO14578 2027 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 SF3B1O75533 1304 aaKnown RBP eCLIP20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 PTGESO14684 152 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 KIF4AO95239 1232 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 PAPLNO95428 1278 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 EDN1P05305 212 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 XRCC6P12956 609 aaKnown RBP eCLIP20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 TUSC3Q13454 348 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 ANGPT1Q15389 498 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 ZBTB8OSQ8IWT0 167 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 NKD2Q969F2 451 aaPredicted RBP20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 SNX27Q96L92 541 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 FZD8Q9H461 694 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 ZDHHC7Q9NXF8 308 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 SNTG2Q9NY99 539 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 WNT16Q9UBV4 365 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 COL4A3Q01955 1670 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 CACNA1IQ9P0X4 2223 aa20.38■□□□□ 0.85
SSSCA1-206ENST00000531405 ZMYND10O75800 440 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 LAMP2P13473 410 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 LIG1P18858 919 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 CEP57Q86XR8 500 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 MCPH1Q8NEM0 835 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 PRIMPOLQ96LW4 560 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 TUFT1Q9NNX1 390 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 EP300Q09472 2414 aaPredicted RBP20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 MYH11P35749 1972 aa20.37■□□□□ 0.85
SSSCA1-206ENST00000531405 N4BP3O15049 544 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 RECQL4O94761 1208 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 C1RP00736 705 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 SRFP11831 508 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 RFX1P22670 979 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 NEK4P51957 841 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 CREMQ03060 361 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 PRPF4BQ13523 1007 aaKnown RBP20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 FAM187BQ17R55 369 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 FAM171A1Q5VUB5 890 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 NOSTRINQ8IVI9 506 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 GPR65Q8IYL9 337 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 GPR152Q8TDT2 470 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 CLSTN3Q9BQT9 956 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 POLD4Q9HCU8 107 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 FBXW11Q9UKB1 542 aa20.36■□□□□ 0.85
SSSCA1-206ENST00000531405 ADAM12O43184 909 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 PRKCBP05771 671 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 NTHL1P78549 312 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 HTR4Q13639 388 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 NAB2Q15742 525 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 PSMD5Q16401 504 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 EEF1DP3Q658K8 133 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 GRASPQ7Z6J2 395 aaPredicted RBP20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 LNX1Q8TBB1 728 aaPredicted RBP20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 NACC1Q96RE7 527 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 POLR3CQ9BUI4 534 aaPredicted RBP20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms