RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 NOTCH4Q99466 2003 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 SPTLC1O15269 473 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 TADA2AO75478 443 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 RFC5P40937 340 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 FOSBP53539 338 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 ANAPC15P60006 121 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 INF2Q27J81 1249 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 PPM1LQ5SGD2 360 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 CEP57Q86XR8 500 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 GSTCDQ8NEC7 633 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 ING5Q8WYH8 240 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 LXNQ9BS40 222 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 TRIM6Q9C030 488 aaPredicted RBP12.59□□□□□ -0.39
SF3B2-208ENST00000529994 LTB4R2Q9NPC1 389 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 SH3GLB2Q9NR46 395 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 RGL1Q9NZL6 768 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 FBXW11Q9UKB1 542 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 KCNJ14Q9UNX9 436 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
SF3B2-208ENST00000529994 PCDHGA2Q9Y5H1 932 aa12.59□□□□□ -0.39
SF3B2-208ENST00000529994 ZFP37Q9Y6Q3 630 aaPredicted RBP12.59□□□□□ -0.39
SF3B2-208ENST00000529994 CACNA1GO43497 2377 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 ASAP2O43150 1006 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 B4GALT5O43286 388 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 CDKL5O76039 1030 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 LARGE1O95461 756 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 NPTXRO95502 500 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 C8AP07357 584 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 TARSP26639 723 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 AXLP30530 894 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 PTENP60484 403 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 CYP4A11Q02928 519 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 PRKCQQ04759 706 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 NCBP1Q09161 790 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 ZBTB41Q5SVQ8 909 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 TPRG1Q6ZUI0 275 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 EXOC8Q8IYI6 725 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 BLIDQ8IZY5 108 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 TCP11Q8WWU5 503 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 SECISBP2LQ93073 1101 aaKnown RBP12.58□□□□□ -0.4
SF3B2-208ENST00000529994 MTRQ99707 1265 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 CLSTN3Q9BQT9 956 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 VWA8A3KMH1 1905 aa12.58□□□□□ -0.4
SF3B2-208ENST00000529994 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 M0R2N6 131 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 ADAM12O43184 909 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 PFKFB2O60825 505 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
SF3B2-208ENST00000529994 C1RP00736 705 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 SDHBP21912 280 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 NEK4P51957 841 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 CREMQ03060 361 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 MBTD1Q05BQ5 628 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 HSP90AA2PQ14568 343 aaPredicted RBP12.57□□□□□ -0.4
SF3B2-208ENST00000529994 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 PSMD5Q16401 504 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 LPAL2Q16609 132 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 AMHR2Q16671 573 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 FAM171A1Q5VUB5 890 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
SF3B2-208ENST00000529994 ZBTB44Q8NCP5 570 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 ASAP3Q8TDY4 903 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 CCDC51Q96ER9 411 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 XPNPEP1Q9NQW7 623 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 GJB4Q9NTQ9 266 aa12.57□□□□□ -0.4
SF3B2-208ENST00000529994 SF3B1O75533 1304 aaKnown RBP eCLIP12.57□□□□□ -0.43e-9■■■■■ 39.6
SF3B2-208ENST00000529994 RALGAPA1Q6GYQ0 2036 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
SF3B2-208ENST00000529994 XYLBO75191 536 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 KIF4AO95239 1232 aa12.56□□□□□ -0.4
SF3B2-208ENST00000529994 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3B2-208ENST00000529994 TGM1P22735 817 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms