RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 MIOSQ9NXC5 875 aa3.95□□□□□ -1.78
PTPRC-213ENST00000529828 KIAA1468Q9P260 1216 aa3.95□□□□□ -1.78
PTPRC-213ENST00000529828 NBEAQ8NFP9 2946 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FREM2Q5SZK8 3169 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 MYH9P35579 1960 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FANCMQ8IYD8 2048 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ARL5CA6NH57 179 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 hCG_1984214I3L0E3 225 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 EDIL3O43854 480 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 GDF9O60383 454 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZNF623O75123 536 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 STBD1O95210 358 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 TDP2O95551 362 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ADRB1P08588 477 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ITGA4P13612 1032 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 NCLP19338 710 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 TGM1P22735 817 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 AKAP5P24588 427 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 HOXA11P31270 313 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 DNM2P50570 870 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 JAK3P52333 1124 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 DSG1Q02413 1049 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SRSF5Q13243 272 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 XKR3Q5GH77 459 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 RTP2Q5QGT7 225 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FUT10Q6P4F1 479 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PRR23BQ6ZRT6 265 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZNF410Q86VK4 478 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZNF713Q8N859 430 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SMG8Q8ND04 991 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SLC5A5Q92911 643 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FGF13Q92913 245 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SECISBP2LQ93073 1101 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 NXPE3Q969Y0 559 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SHDQ96IW2 340 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PAAF1Q9BRP4 392 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 MTA3Q9BTC8 594 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 TRAIPQ9BWF2 469 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 EPC1Q9H2F5 836 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 IFT122Q9HBG6 1241 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 RXFP1Q9HBX9 757 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 C6orf50Q9HD87 102 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ANO2Q9NQ90 1003 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 HEBP1Q9NRV9 189 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 HCFC1R1Q9NWW0 138 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZSCAN32Q9NX65 697 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 KLK14Q9P0G3 267 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 VPS54Q9P1Q0 977 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 GMEB2Q9UKD1 530 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 FBXO4Q9UKT5 387 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 CDH7Q9ULB5 785 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 NDRG2Q9UN36 371 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 IPPQ9Y573 584 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PCDHGA2Q9Y5H1 932 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 COL4A3BPQ9Y5P4 624 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 AKAP13Q12802 2813 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 IGKV6-21A0A0C4DH24 114 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PRR5-ARHGAP8B1AHC4 643 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ADAM12O43184 909 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 MAFO75444 373 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZMYND10O75800 440 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 C8AP07357 584 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ARHGAP8P85298 464 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 MTAPQ13126 283 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 GRM2Q14416 872 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PROX2Q3B8N5 592 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZNF528Q3MIS6 628 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ADCK5Q3MIX3 580 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZBTB41Q5SVQ8 909 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 LIN9Q5TKA1 542 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ANO5Q75V66 913 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 MRPL10Q7Z7H8 261 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 CEP57Q86XR8 500 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 RNF168Q8IYW5 571 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZBTB44Q8NCP5 570 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PRPF31Q8WWY3 499 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 RTKNQ9BST9 563 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 DDX23Q9BUQ8 820 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PHF20Q9BVI0 1012 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 NIFKQ9BYG3 293 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PLA2G2FQ9BZM2 168 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 INO80BQ9C086 356 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 GLT8D2Q9H1C3 349 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 NXF3Q9H4D5 531 aaKnown RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 PLEKHA4Q9H4M7 779 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 ZDHHC7Q9NXF8 308 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 WRAP73Q9P2S5 460 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-213ENST00000529828 DPP7Q9UHL4 492 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 CNTNAP2Q9UHC6 1331 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 DOCK6Q96HP0 2047 aa3.94□□□□□ -1.78
PTPRC-213ENST00000529828 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MIA3Q5JRA6 1907 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MYH15Q9Y2K3 1946 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CARNS1A5YM72 827 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CASTOR2A6NHX0 329 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 EML1O00423 815 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 B4GALT5O43286 388 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TSPAN1O60635 241 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms