RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PRR33A8MZF0 331 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 ABLIM1O14639 778 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 RECQL4O94761 1208 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 URODP06132 367 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 THP07101 528 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
COPB1-206ENST00000529210 PLS3P13797 630 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 SCP2P22307 547 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 LLGL2Q6P1M3 1020 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 DENND4AQ7Z401 1863 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 CABP7Q86V35 215 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 RNF135Q8IUD6 432 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
COPB1-206ENST00000529210 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
COPB1-206ENST00000529210 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
COPB1-206ENST00000529210 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 TMEM189-UBE2V1I3L0A0 370 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 EPCAMP16422 314 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 SYT1P21579 422 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 GRM5P41594 1212 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 MTHFRP42898 656 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 GLUD2P49448 558 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 ZNF131P52739 623 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 RESTQ13127 1097 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 HSP90AA2PQ14568 343 aaPredicted RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 PTPAQ15257 358 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 ARSHQ5FYA8 562 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 CES5AQ6NT32 575 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 ALKAL1Q6UXT8 129 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 TMEM161BQ8NDZ6 487 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 CMASQ8NFW8 434 aaPredicted RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 HDAC7Q8WUI4 952 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 SNX21Q969T3 373 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 PPP1R10Q96QC0 940 aaKnown RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
COPB1-206ENST00000529210 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 LARSQ9P2J5 1176 aaKnown RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
COPB1-206ENST00000529210 MTCL1Q9Y4B5 1905 aaKnown RBP13.25□□□□□ -0.29
COPB1-206ENST00000529210 SF3B1O75533 1304 aaKnown RBP eCLIP13.24□□□□□ -0.298e-14■■■■■ 28.8
COPB1-206ENST00000529210 H0YCG3 227 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 ADH1AP07327 375 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 MCF2P10911 925 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 COL9A1P20849 921 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 KLRC2P26717 231 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 UBA7P41226 1012 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 SMTNP53814 917 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 NCKAP1LP55160 1127 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 CREMQ03060 361 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 USP41Q3LFD5 358 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 C15orf39Q6ZRI6 1047 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 FBXL18Q96ME1 805 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 GPR62Q9BZJ7 368 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 CDT1Q9H211 546 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 SFXN1Q9H9B4 322 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 USTQ9Y2C2 406 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 USP20Q9Y2K6 914 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 PLXNA3P51805 1871 aa13.24□□□□□ -0.29
COPB1-206ENST00000529210 CITO14578 2027 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 F8W810 466 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 TEX28O15482 410 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 TOM1L1O75674 476 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 CA8P35219 290 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 GRIN1Q05586 938 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 EDAQ92838 391 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 UROC1Q96N76 676 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 PAAF1Q9BRP4 392 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 ZSCAN16Q9H4T2 348 aaPredicted RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 POMKQ9H5K3 350 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 TOPORSQ9NS56 1045 aaPredicted RBP13.23□□□□□ -0.29
COPB1-206ENST00000529210 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 NR2E1Q9Y466 385 aa13.23□□□□□ -0.29
COPB1-206ENST00000529210 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms