RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 PLEKP08567 350 aaPredicted RBP8.52□□□□□ -1.05
C11orf88-203ENST00000529167 MYL6BP14649 208 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 GNAT2P19087 354 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 PTPN4P29074 926 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 EPHB2P29323 1055 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 GRIA2P42262 883 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 POLGP54098 1239 aaPredicted RBP8.52□□□□□ -1.05
C11orf88-203ENST00000529167 PPP4CP60510 307 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 CCDC174Q6PII3 467 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 CHST3Q7LGC8 479 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 OSTM1Q86WC4 334 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 AIFM3Q96NN9 605 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 RTFDC1Q9BY42 306 aaPredicted RBP8.52□□□□□ -1.05
C11orf88-203ENST00000529167 CSRNP2Q9H175 543 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 GBA3Q9H227 469 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 GBA2Q9HCG7 927 aaPredicted RBP8.52□□□□□ -1.05
C11orf88-203ENST00000529167 NLRC4Q9NPP4 1024 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 VPS54Q9P1Q0 977 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 CCPG1Q9ULG6 757 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 SSX2IPQ9Y2D8 614 aa8.52□□□□□ -1.05
C11orf88-203ENST00000529167 SH3PXD2BA1X283 911 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 PSMG1O95456 288 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZBTB48P10074 688 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 MAGEA1P43355 309 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 GMPSP49915 693 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 CXCL9Q07325 125 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 LRRC8BQ6P9F7 803 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 HS2ST1Q7LGA3 356 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 UBE2Q1Q7Z7E8 422 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 KLHL7Q8IXQ5 586 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 TTC5Q8N0Z6 440 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 PLEKHO2Q8TD55 490 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 VPS50Q96JG6 964 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 HGH1Q9BTY7 390 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 KIAA1683Q9H0B3 1180 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 TPK1Q9H3S4 243 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 SYNCQ9H7C4 482 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 GPHNQ9NQX3 736 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZDHHC7Q9NXF8 308 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZMAT5Q9UDW3 170 aaKnown RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 DNAJB4Q9UDY4 337 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 HAO1Q9UJM8 370 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZNRF3Q9ULT6 936 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 FBP2O00757 339 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 CAPN9O14815 690 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 DAPK3O43293 454 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 RANBP6O60518 1105 aaKnown RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 HSPD1P10809 573 aaKnown RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 COL6A2P12110 1019 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 IFNAR2P48551 515 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 RRAGBQ5VZM2 374 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 ACAD11Q709F0 780 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 MB21D2Q8IYB1 491 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 DDX12PQ92771 950 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 CRAMP1Q96RY5 1269 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 RPAP3Q9H6T3 665 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-203ENST00000529167 USP29Q9HBJ7 922 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 KLHL42Q9P2K6 505 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 PAPPA2Q9BXP8 1791 aa8.51□□□□□ -1.05
C11orf88-203ENST00000529167 SSU72P8A0A1W2PR75 194 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 FOXD2O60548 495 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 PDE5AO76074 875 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ZBED1O96006 694 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 AFMP43652 599 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 POU5F1Q01860 360 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NAB2Q15742 525 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ACSBG2Q5FVE4 666 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 FAM186BQ8IYM0 893 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 C2orf69Q8N8R5 385 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NMD3Q96D46 503 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DNAJC1Q96KC8 554 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NEUROD6Q96NK8 337 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 HAUS7Q99871 368 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 RBM38Q9H0Z9 239 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 AZI2Q9H6S1 392 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ZNF408Q9H9D4 720 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 EURLQ9NYK6 297 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 SCHIP1Q9P0W5 487 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 TELO2Q9Y4R8 837 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 PCDHB2Q9Y5E7 798 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 MGEA5O60502 916 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ZFYP08048 801 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 EIF4A3P38919 411 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NEK3P51956 506 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 TBL3Q12788 808 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 RABL6Q3YEC7 729 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 VPS37AQ8NEZ2 397 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CASP10Q92851 521 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms