RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 WNT10BO00744 389 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 PF4V1P10720 104 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 ZNF20P17024 532 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 ZSCAN20P17040 1043 aaPredicted RBP7.57□□□□□ -1.2
PCF11-202ENST00000528336 HK1P19367 917 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 EPHB1P54762 984 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 TMEM240Q5SV17 173 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 APBB1IPQ7Z5R6 666 aaPredicted RBP7.57□□□□□ -1.2
PCF11-202ENST00000528336 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
PCF11-202ENST00000528336 ATXN2LQ8WWM7 1075 aaKnown RBP7.57□□□□□ -1.2
PCF11-202ENST00000528336 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 PGBD4Q96DM1 585 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 MANSC1Q9H8J5 431 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 ZNF180Q9UJW8 692 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 GIT1Q9Y2X7 761 aa7.57□□□□□ -1.2
PCF11-202ENST00000528336 MUSKO15146 869 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 IPO13O94829 963 aaKnown RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 ABLIM3O94929 683 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 ADAM17P78536 824 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 PRKD1Q15139 912 aaPredicted RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 ZNF572Q7Z3I7 529 aaPredicted RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 FAM83AQ86UY5 434 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 JPH3Q8WXH2 748 aaPredicted RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 EDAQ92838 391 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 KAT5Q92993 513 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 LSM14BQ9BX40 385 aaKnown RBP7.56□□□□□ -1.2
PCF11-202ENST00000528336 SPON1Q9HCB6 807 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 ZIM2Q9NZV7 527 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 ANKRD6Q9Y2G4 727 aa7.56□□□□□ -1.2
PCF11-202ENST00000528336 RAP2AP10114 183 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 IL2RBP14784 551 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 FPR1P21462 350 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 SCNN1GP51170 649 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 CRHR2Q13324 411 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 Q6ZRM9 215 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 RSPH3Q86UC2 560 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 ZGPATQ8N5A5 531 aaKnown RBP7.55□□□□□ -1.2
PCF11-202ENST00000528336 MDGA1Q8NFP4 955 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 SLC35B2Q8TB61 432 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 RTFDC1Q9BY42 306 aaPredicted RBP7.55□□□□□ -1.2
PCF11-202ENST00000528336 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 TDP1Q9NUW8 608 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 TMEM140Q9NV12 185 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 RUVBL1Q9Y265 456 aaKnown RBP7.55□□□□□ -1.2
PCF11-202ENST00000528336 ACTL7AQ9Y615 435 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 EID1Q9Y6B2 187 aa7.55□□□□□ -1.2
PCF11-202ENST00000528336 ARID4BQ4LE39 1312 aaPredicted RBP7.54□□□□□ -1.2
PCF11-202ENST00000528336 PRR5-ARHGAP8B1AHC4 643 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 PRRG2O14669 202 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 CYP27B1O15528 508 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 GPR32O75388 356 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 AMY1AP04745 511 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 ALOX15P16050 662 aaPredicted RBP7.54□□□□□ -1.2
PCF11-202ENST00000528336 PCSK1P29120 753 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 FLT3LGP49771 235 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 CNGB1Q14028 1251 aaPredicted RBP7.54□□□□□ -1.2
PCF11-202ENST00000528336 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
PCF11-202ENST00000528336 AFMIDQ63HM1 303 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 CYFIP2Q96F07 1278 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 TMX3Q96JJ7 454 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 GPR87Q9BY21 358 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 RHOBTB2Q9BYZ6 727 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 CPEB1Q9BZB8 566 aaKnown RBP7.54□□□□□ -1.2
PCF11-202ENST00000528336 KCNH6Q9H252 994 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 MOCS1Q9NZB8 636 aa7.54□□□□□ -1.2
PCF11-202ENST00000528336 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
PCF11-202ENST00000528336 E2F8A0AVK6 867 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 TBKBP1A7MCY6 615 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 CXorf49A8MYA2 514 aaPredicted RBP7.53□□□□□ -1.2
PCF11-202ENST00000528336 DDCP20711 480 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 PDCP20941 246 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 RAP2BP61225 183 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 PTH1RQ03431 593 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 SP140Q13342 867 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
PCF11-202ENST00000528336 CDSNQ15517 529 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 SPDYAQ5MJ70 313 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 DOK3Q7L591 496 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 CATIPQ7Z7H3 387 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 CDK5RAP1Q96SZ6 601 aaKnown RBP7.53□□□□□ -1.2
PCF11-202ENST00000528336 MNTQ99583 582 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 GPR20Q99678 358 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 MRI1Q9BV20 369 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 POGKQ9P215 609 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 PCDHB1Q9Y5F3 818 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
PCF11-202ENST00000528336 B5MCH6 92 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 BUD31P41223 144 aaPredicted RBP7.52□□□□□ -1.21
PCF11-202ENST00000528336 ALDH1A3P47895 512 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 MAN2A2P49641 1150 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 RABGGTBP53611 331 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
PCF11-202ENST00000528336 LRRC41Q15345 812 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 RRP12Q5JTH9 1297 aaKnown RBP7.52□□□□□ -1.21
PCF11-202ENST00000528336 TPH2Q8IWU9 490 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms