RNA–Protein interactions for RNA: ENST00000528065.1

NCAPD3-207, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 4

Gene NCAPD3, Length 557 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-207ENST00000528065 ST6GALNAC2Q9UJ37 374 aa4.12□□□□□ -1.75
NCAPD3-207ENST00000528065 SIK3Q9Y2K2 1263 aa4.12□□□□□ -1.75
NCAPD3-207ENST00000528065 SH3BP1Q9Y3L3 701 aa4.12□□□□□ -1.75
NCAPD3-207ENST00000528065 IPPQ9Y573 584 aa4.12□□□□□ -1.75
NCAPD3-207ENST00000528065 HMGB1P1B2RPK0 211 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 PATE3B3GLJ2 98 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 K7ESM1 405 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 SCGB1D2O95969 90 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 POU2F2P09086 479 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 SYN1P17600 705 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 VCAM1P19320 739 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 PDCP20941 246 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 GJC2Q5T442 439 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 TMED8Q6PL24 325 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 PDZD4Q76G19 769 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 MIGA2Q7L4E1 593 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 POLNQ7Z5Q5 900 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 CATIPQ7Z7H3 387 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 SGMS1Q86VZ5 419 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 FMNL3Q8IVF7 1028 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 ELOA2Q8IYF1 753 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 EXOC8Q8IYI6 725 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 TRMT2AQ8IZ69 625 aaKnown RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 KAT5Q92993 513 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 CEP95Q96GE4 821 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 LRGUKQ96M69 825 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 CAMKK2Q96RR4 588 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 SENP6Q9GZR1 1112 aaPredicted RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 CHMP4BQ9H444 224 aaKnown RBP4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 DEF6Q9H4E7 631 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 TDP1Q9NUW8 608 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 SLC30A1Q9Y6M5 507 aa4.11□□□□□ -1.75
NCAPD3-207ENST00000528065 WNT10BO00744 389 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 TSPAN6O43657 245 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 RFPL1O75677 317 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 AKAP5P24588 427 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 CYP2C19P33261 490 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 HHEXQ03014 270 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 ELAVL1Q15717 326 aaKnown RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 MFSD14BQ5SR56 506 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 IFIT1BQ5T764 474 aaKnown RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 LILRA6Q6PI73 481 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 RSPH3Q86UC2 560 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 XYLT1Q86Y38 959 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 CHST13Q8NET6 341 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 DNERQ8NFT8 737 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 TSR2Q969E8 191 aaKnown RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 CYFIP2Q96F07 1278 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 SAMD11Q96NU1 681 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 MPHOSPH9Q99550 1183 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 NUP88Q99567 741 aaPredicted RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 CPPED1Q9BRF8 314 aaPredicted RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 GTPBP4Q9BZE4 634 aaKnown RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 MANSC1Q9H8J5 431 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 LANCL2Q9NS86 450 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 AJAP1Q9UKB5 411 aaPredicted RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 PNMA8BQ9ULN7 279 aaPredicted RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 HDAC5Q9UQL6 1122 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 LAS1LQ9Y4W2 734 aaKnown RBP4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 PCDHB1Q9Y5F3 818 aa4.1□□□□□ -1.75
NCAPD3-207ENST00000528065 PLEKHD1A6NEE1 506 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 TTC36A6NLP5 189 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 PRPF3O43395 683 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 AP1G1O43747 822 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 MFAP3LO75121 409 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 PARNO95453 639 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 AMY1AP04745 511 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 IL2RBP14784 551 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 GNAT2P19087 354 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 DDCP20711 480 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ACO1P21399 889 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 FPR1P21462 350 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 COMTP21964 271 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 FXR1P51114 621 aaKnown RBP eCLIP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 HS1BP3Q53T59 392 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 FAM47AQ5JRC9 791 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 FAM102BQ5T8I3 360 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 SPTY2D1Q68D10 685 aaPredicted RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ANKS6Q68DC2 871 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 PPP4R3AQ6IN85 833 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 MFSD5Q6N075 450 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ZNF585AQ6P3V2 769 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 CASC1Q6TDU7 716 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 Q6ZSN1 163 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 USP45Q70EL2 814 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ZNF572Q7Z3I7 529 aaPredicted RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 FAM83AQ86UY5 434 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 WDR75Q8IWA0 830 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 GSPT2Q8IYD1 628 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 PRR18Q8N4B5 295 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ZNF808Q8N4W9 903 aaPredicted RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 BORCS6Q96GS4 357 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 TMX3Q96JJ7 454 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 CLPTM1LQ96KA5 538 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 WWC2-AS2Q96NR7 200 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 CD248Q9HCU0 757 aa4.09□□□□□ -1.75
NCAPD3-207ENST00000528065 TMEM140Q9NV12 185 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms