RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ACSF2Q96CM8 615 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-212ENST00000527887 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 PLEKHA4Q9H4M7 779 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 TMEM134Q9H6X4 195 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 KLK14Q9P0G3 267 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-212ENST00000527887 SF3B1O75533 1304 aaKnown RBP eCLIP15.64■□□□□ 0.09
CAPN1-212ENST00000527887 C2CD4DB7Z1M9 353 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 H3BQV1 296 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 C2CD2LO14523 706 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 PAPLNO95428 1278 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 ELAVL2Q12926 359 aaKnown RBP15.63■□□□□ 0.09
CAPN1-212ENST00000527887 MTMR3Q13615 1198 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 HSP90AA2PQ14568 343 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-212ENST00000527887 ARL6IP4Q66PJ3 421 aaKnown RBP15.63■□□□□ 0.09
CAPN1-212ENST00000527887 PDXDC1Q6P996 788 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 TMC5Q6UXY8 1006 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 OTOP3Q7RTS5 596 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 SUGP1Q8IWZ8 645 aaKnown RBP15.63■□□□□ 0.09
CAPN1-212ENST00000527887 TDRD5Q8NAT2 981 aaKnown RBP15.63■□□□□ 0.09
CAPN1-212ENST00000527887 NT5C3AQ9H0P0 336 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 SNTG2Q9NY99 539 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 TNFSF13BQ9Y275 285 aa15.63■□□□□ 0.09
CAPN1-212ENST00000527887 SLC26A4O43511 780 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 RECQL4O94761 1208 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 GJB2P29033 226 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-212ENST00000527887 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-212ENST00000527887 DMP1Q13316 513 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-212ENST00000527887 HYIQ5T013 277 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 ATF7IP2Q5U623 682 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 CCDC149Q6ZUS6 474 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 FBXL6Q8N531 539 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 KREMEN2Q8NCW0 462 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 ASIC4Q96FT7 647 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 IPO9Q96P70 1041 aaKnown RBP15.62■□□□□ 0.09
CAPN1-212ENST00000527887 NTPCRQ9BSD7 190 aaKnown RBP15.62■□□□□ 0.09
CAPN1-212ENST00000527887 GPR62Q9BZJ7 368 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 MAN1C1Q9NR34 630 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 KCND2Q9NZV8 630 aa15.62■□□□□ 0.09
CAPN1-212ENST00000527887 TTLL13PA6NNM8 815 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 PTGESO14684 152 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 GUCY2CP25092 1073 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 NPTX2P47972 431 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 NUBP1P53384 320 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 PEX3P56589 373 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 IL17AQ16552 155 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 RINT1Q6NUQ1 792 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 C1orf186Q6ZWK4 172 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 STAMQ92783 540 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 AK8Q96MA6 479 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 UROC1Q96N76 676 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 TOPORSQ9NS56 1045 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-212ENST00000527887 ZDHHC7Q9NXF8 308 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 SMC3Q9UQE7 1217 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 PIEZO1Q92508 2521 aa15.61■□□□□ 0.09
CAPN1-212ENST00000527887 MUC6Q6W4X9 2439 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 CCDC195A0A1B0GUA6 201 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 CCDC169A6NNP5 214 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 E9PMD0 336 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 BMP15O95972 392 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 LIG1P18858 919 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 SP100P23497 879 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 NT5DC1Q5TFE4 455 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 EEF1DP3Q658K8 133 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 KANK3Q6NY19 840 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 LILRA6Q6PI73 481 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 SPIRE2Q8WWL2 714 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 RIN2Q8WYP3 895 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 ACO2Q99798 780 aaKnown RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 TTPALQ9BTX7 342 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 MMTAG2Q9BU76 263 aaKnown RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 KIFC3Q9BVG8 833 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 MRPL4Q9BYD3 311 aaKnown RBP15.6■□□□□ 0.09
CAPN1-212ENST00000527887 KMT5AQ9NQR1 393 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 ARHGAP28Q9P2N2 729 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 CDH22Q9UJ99 828 aa15.6■□□□□ 0.09
CAPN1-212ENST00000527887 TECTAO75443 2155 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 F8W810 466 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 TMEM189-UBE2V1I3L0A0 370 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 HIP1RO75146 1068 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 SCP2P22307 547 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 CDC25AP30304 524 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 GRM5P41594 1212 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 SMTNP53814 917 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 YARSP54577 528 aaKnown RBP15.59■□□□□ 0.09
CAPN1-212ENST00000527887 NAB2Q15742 525 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 RTL10Q7L3V2 364 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 DAW1Q8N136 415 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 SYT2Q8N9I0 419 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-212ENST00000527887 PIK3R5Q8WYR1 880 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 NXPE3Q969Y0 559 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 IRF2BPLQ9H1B7 796 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 WDR6Q9NNW5 1121 aaKnown RBP15.59■□□□□ 0.09
CAPN1-212ENST00000527887 LIMD1Q9UGP4 676 aa15.59■□□□□ 0.09
CAPN1-212ENST00000527887 CASTOR2A6NHX0 329 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms