RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 COLGALT2Q8IYK4 626 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 ASAP3Q8TDY4 903 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 HASPINQ8TF76 798 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 ZCCHC14Q8WYQ9 949 aaKnown RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 ZNF274Q96GC6 653 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 MYADMQ96S97 322 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 MTRQ99707 1265 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 JPH2Q9BR39 696 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 EPC1Q9H2F5 836 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 DHX33Q9H6R0 707 aaKnown RBP11.03□□□□□ -0.64
CAPN1-210ENST00000527699 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 WNT16Q9UBV4 365 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 IRAK3Q9Y616 596 aa11.03□□□□□ -0.64
CAPN1-210ENST00000527699 MIA3Q5JRA6 1907 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 TMEM8BA6NDV4 472 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 ARL5CA6NH57 179 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 GDF9O60383 454 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 TSPAN1O60635 241 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 LILRB3O75022 631 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 SOD2P04179 222 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 RFC5P40937 340 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 EVCP57679 992 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 EPHA7Q15375 998 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 ZNF528Q3MIS6 628 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 PRSS55Q6UWB4 352 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-210ENST00000527699 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-210ENST00000527699 OTOP3Q7RTS5 596 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 MAML2Q8IZL2 1156 aaPredicted RBP11.02□□□□□ -0.65
CAPN1-210ENST00000527699 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 NECAB1Q8N987 351 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 PIGOQ8TEQ8 1089 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 SMG7Q92540 1137 aaKnown RBP11.02□□□□□ -0.65
CAPN1-210ENST00000527699 TMEM175Q9BSA9 504 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 POLD4Q9HCU8 107 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 XPNPEP1Q9NQW7 623 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 TPCN1Q9ULQ1 816 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 USTQ9Y2C2 406 aa11.02□□□□□ -0.65
CAPN1-210ENST00000527699 WNT7AO00755 349 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 USO1O60763 962 aaKnown RBP11.01□□□□□ -0.65
CAPN1-210ENST00000527699 GLUD1P00367 558 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 GLUD2P49448 558 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 NTHL1P78549 312 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 CAPSQ13938 189 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 MOXD1Q6UVY6 613 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 CEP57Q86XR8 500 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 C4orf19Q8IY42 314 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 TCP11Q8WWU5 503 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 EIF2AK1Q9BQI3 630 aaKnown RBP11.01□□□□□ -0.65
CAPN1-210ENST00000527699 GPR62Q9BZJ7 368 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 FOXQ1Q9C009 403 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-210ENST00000527699 CXCL16Q9H2A7 254 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 GPRC5CQ9NQ84 441 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 ZSCAN32Q9NX65 697 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 DLGAP2Q9P1A6 1054 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 KANSL3Q9P2N6 904 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 FBXO4Q9UKT5 387 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 BPTFQ12830 3046 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 CNTNAP2Q9UHC6 1331 aa11.01□□□□□ -0.65
CAPN1-210ENST00000527699 CASTOR2A6NHX0 329 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 GAS2O43903 313 aaKnown RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 DKC1O60832 514 aaKnown RBP eCLIP11□□□□□ -0.65
CAPN1-210ENST00000527699 LRRN2O75325 713 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 SLITRK3O94933 977 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 BAG4O95429 457 aaKnown RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 LARGE1O95461 756 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 CTDNEP1O95476 244 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 ADH1AP07327 375 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 ARF4P18085 180 aaPredicted RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 SPINK2P20155 84 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 TXKP42681 527 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 FOXC1Q12948 553 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 SLC44A3Q8N4M1 653 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 PAAF1Q9BRP4 392 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 CSRNP2Q9H175 543 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 ZSWIM4Q9H7M6 989 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 SEMA4GQ9NTN9 838 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
CAPN1-210ENST00000527699 CLUHO75153 1309 aa11□□□□□ -0.65
CAPN1-210ENST00000527699 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
CAPN1-210ENST00000527699 LRRIQ4A6NIV6 560 aa10.99□□□□□ -0.65
CAPN1-210ENST00000527699 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms