RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KCNC3Q14003 757 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 CLUL1Q15846 466 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 FOXD4L5Q5VV16 416 aaPredicted RBP28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 TMEM184AQ6ZMB5 413 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 FOXD4L4Q8WXT5 416 aaPredicted RBP28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 KCNN1Q92952 543 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 PARVGQ9HBI0 331 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 MARCH5Q9NX47 278 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 TFIP11Q9UBB9 837 aaKnown RBP28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 GDAQ9Y2T3 454 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 SPTLC2O15270 562 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 PPP6R2O75170 966 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 SCP2P22307 547 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 PROZP22891 400 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 SMAD4Q13485 552 aaKnown RBP28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 ZNF568Q3ZCX4 644 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 MYCT1Q8N699 235 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 VN1R2Q8NFZ6 395 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 TCHPQ9BT92 498 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 CDT1Q9H211 546 aa28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 BARX2Q9UMQ3 279 aaPredicted RBP28.92■■■□□ 2.22
TSPAN4-217ENST00000527644 MYH15Q9Y2K3 1946 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 PTGESO14684 152 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 MBTPS2O43462 519 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 YEATS4O95619 227 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 THP07101 528 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 MCF2P10911 925 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 GRM5P41594 1212 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 TUSC3Q13454 348 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 MPZL3Q6UWV2 235 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 CCDC73Q6ZRK6 1079 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 HAUS6Q7Z4H7 955 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 FAM178BQ8IXR5 827 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 TMEM87AQ8NBN3 555 aa28.91■■■□□ 2.22
TSPAN4-217ENST00000527644 CLASP2O75122 1294 aaKnown RBP28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 TBCAO75347 108 aaKnown RBP28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 BRD1O95696 1058 aa28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 SOD2P04179 222 aa28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 RBM10P98175 930 aaKnown RBP28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 ZPBP2Q6X784 338 aa28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 AUTS2Q8WXX7 1259 aa28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 CCDC94Q9BW85 323 aaPredicted RBP28.9■■■□□ 2.22
TSPAN4-217ENST00000527644 ABLIM1O14639 778 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 TOM1L1O75674 476 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 EFEMP2O95967 443 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 PTPN14Q15678 1187 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 SMAD2Q15796 467 aaKnown RBP28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 ATL3Q6DD88 541 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 ZBTB33Q86T24 672 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 SMRP1Q8NCR6 262 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 HERC2P3Q9BVR0 1158 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 ZHX3Q9H4I2 956 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 TOPORSQ9NS56 1045 aaPredicted RBP28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 MUC3AQ02505 3323 aa28.89■■■□□ 2.22
TSPAN4-217ENST00000527644 TRAK2O60296 914 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 YARSP54577 528 aaKnown RBP28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 PKP1Q13835 747 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 LLGL2Q6P1M3 1020 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 SV2BQ7L1I2 683 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 RNF168Q8IYW5 571 aaPredicted RBP28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 CEP120Q8N960 986 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 CASP10Q92851 521 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 CXCL16Q9H2A7 254 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 MRPL17Q9NRX2 175 aaKnown RBP28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 PRKAG3Q9UGI9 489 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 SSX2IPQ9Y2D8 614 aa28.88■■■□□ 2.21
TSPAN4-217ENST00000527644 ABCD1P33897 745 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 NAB2Q15742 525 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 ANKRD54Q6NXT1 300 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 ZBTB45Q96K62 511 aaPredicted RBP28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 EMILIN2Q9BXX0 1053 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 ADAM28Q9UKQ2 775 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 TBX20Q9UMR3 447 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 HCFC2Q9Y5Z7 792 aa28.87■■■□□ 2.21
TSPAN4-217ENST00000527644 F8W810 466 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 K7ENM7 598 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 LILRB3O75022 631 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 URODP06132 367 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 STAT6P42226 847 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 OSTNP61366 133 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 HSP90AA2PQ14568 343 aaPredicted RBP28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 FOXD4L6Q3SYB3 417 aaPredicted RBP28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 FOXD4L3Q6VB84 417 aaPredicted RBP28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 TAS1R1Q7RTX1 841 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 BICD1Q96G01 975 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 ACAP3Q96P50 834 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 PANK2Q9BZ23 570 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 ANKFY1Q9P2R3 1169 aa28.86■■■□□ 2.21
TSPAN4-217ENST00000527644 CASTOR2A6NHX0 329 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 CLDN3O15551 220 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 CUTAO60888 179 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 TADA2AO75478 443 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 HOXB8P17481 243 aaPredicted RBP28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 NOLC1Q14978 699 aaKnown RBP eCLIP28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 XKR4Q5GH76 650 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 FUT10Q6P4F1 479 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 ALKAL1Q6UXT8 129 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 DYMQ7RTS9 669 aa28.85■■■□□ 2.21
TSPAN4-217ENST00000527644 PPFIBP1Q86W92 1011 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms