RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TUSC3Q13454 348 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 ARL6IP4Q66PJ3 421 aaKnown RBP11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 FUT10Q6P4F1 479 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 CD300LGQ6UXG3 332 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 CEP120Q8N960 986 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 EDAQ92838 391 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 ACO2Q99798 780 aaKnown RBP11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TARS2Q9BW92 718 aaKnown RBP11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 EMILIN2Q9BXX0 1053 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 STK39Q9UEW8 545 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 TNFSF13BQ9Y275 285 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 GDAQ9Y2T3 454 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 KIF4AO95239 1232 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 URODP06132 367 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 PLA2G4BP0C869 781 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 RPL17P18621 184 aaKnown RBP11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 ZXDAP98168 799 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 HSP90AA2PQ14568 343 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 DCAF4L1Q3SXM0 396 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 KIAA1841Q6NSI8 718 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 CES5AQ6NT32 575 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 CABP7Q86V35 215 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 PPFIBP1Q86W92 1011 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 TMEM87AQ8NBN3 555 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 HASPINQ8TF76 798 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 ZBTB45Q96K62 511 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 NTPCRQ9BSD7 190 aaKnown RBP11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 CDT1Q9H211 546 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 BLOC1S4Q9NUP1 217 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 ADAM28Q9UKQ2 775 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 PLXNA3P51805 1871 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 TRIP11Q15643 1979 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
PRPF40B-204ENST00000527253 TRIOO75962 3097 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 ZNF318Q5VUA4 2279 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PHLPP2Q6ZVD8 1323 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 NR1I2O75469 434 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 TADA2AO75478 443 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 THP07101 528 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PLS3P13797 630 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PROZP22891 400 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 MTHFRP42898 656 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 OSTNP61366 133 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 RESTQ13127 1097 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PTPAQ15257 358 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 XKR4Q5GH76 650 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 GLRA4Q5JXX5 417 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 ATAT1Q5SQI0 421 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 FAM173BQ6P4H8 233 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 LILRA6Q6PI73 481 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 ALKAL1Q6UXT8 129 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 GPR149Q86SP6 731 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 TMEM161BQ8NDZ6 487 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 RIN2Q8WYP3 895 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 NECTIN4Q96NY8 510 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
PRPF40B-204ENST00000527253 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 VPS37CA5D8V6 355 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 RFPL2O75678 378 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 MAPTP10636 758 aaKnown RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 SYT1P21579 422 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 GRM5P41594 1212 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 KARSQ15046 597 aaKnown RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 PTPN21Q16825 1174 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 USP41Q3LFD5 358 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 PALB2Q86YC2 1186 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 GLYCTKQ8IVS8 523 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 RIPOR3Q96MK2 946 aa11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
PRPF40B-204ENST00000527253 TIPINQ9BVW5 301 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms