RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 FAM205CA6NFA0 338 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 PFKFB2O60825 505 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 DTNBO60941 627 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 DCNP07585 359 aaKnown RBP17.86■□□□□ 0.45
PTPRU-210ENST00000527027 FSHRP23945 695 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 RARRES1P49788 294 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 NR5A1Q13285 461 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 HSP90AA2PQ14568 343 aaPredicted RBP17.86■□□□□ 0.45
PTPRU-210ENST00000527027 SPECC1Q5M775 1068 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 DCLRE1AQ6PJP8 1040 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 CCDC43Q96MW1 224 aaKnown RBP17.86■□□□□ 0.45
PTPRU-210ENST00000527027 DLGAP2Q9P1A6 1054 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 NUMBLQ9Y6R0 609 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 R4GN57 208 aa17.86■□□□□ 0.45
PTPRU-210ENST00000527027 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 XRCC6P12956 609 aaKnown RBP eCLIP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 KRT2P35908 639 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 TUSC3Q13454 348 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 CALCRLQ16602 461 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 RTP2Q5QGT7 225 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 PRSS55Q6UWB4 352 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 PIGOQ8TEQ8 1089 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 WASF1Q92558 559 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 TNFRSF25Q93038 417 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 POLR3FQ9H1D9 316 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 TTC12Q9H892 705 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 ORC3Q9UBD5 711 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-210ENST00000527027 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
PTPRU-210ENST00000527027 CTDNEP1O95476 244 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 HNRNPA1P09651 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 GRASPQ7Z6J2 395 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 C1orf210Q8IVY1 113 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 ST13P5Q8NFI4 369 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 LNX1Q8TBB1 728 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 PIK3R5Q8WYR1 880 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 SHDQ96IW2 340 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 CLSTN3Q9BQT9 956 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 PAAF1Q9BRP4 392 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 TTPALQ9BTX7 342 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 RPP25Q9BUL9 199 aaKnown RBP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 BRMS1Q9HCU9 246 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 PRMT7Q9NVM4 692 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-210ENST00000527027 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 CDH7Q9ULB5 785 aa17.84■□□□□ 0.45
PTPRU-210ENST00000527027 DOCK8Q8NF50 2099 aa17.83■□□□□ 0.45
PTPRU-210ENST00000527027 A0A087WWV3 80 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 LRRIQ4A6NIV6 560 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 SP9P0CG40 484 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 TXKP42681 527 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 STARD6P59095 220 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 GPC5P78333 572 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 LIN9Q5TKA1 542 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 FAM171A1Q5VUB5 890 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 ZC3H14Q6PJT7 736 aaKnown RBP17.83■□□□□ 0.44
PTPRU-210ENST00000527027 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 FGF14Q92915 247 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 FZD8Q9H461 694 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 FBXW11Q9UKB1 542 aa17.83■□□□□ 0.44
PTPRU-210ENST00000527027 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 USO1O60763 962 aaKnown RBP17.82■□□□□ 0.44
PTPRU-210ENST00000527027 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
PTPRU-210ENST00000527027 HOXA9P31269 272 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 NTHL1P78549 312 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 PSMD5Q16401 504 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 FAM187BQ17R55 369 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 PPM1LQ5SGD2 360 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 PARM1Q6UWI2 310 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 MAEAQ7L5Y9 396 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 PJA1Q8NG27 643 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 HASPINQ8TF76 798 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 FOXQ1Q9C009 403 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
PTPRU-210ENST00000527027 PTGESO14684 152 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 KIF4AO95239 1232 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 THP07101 528 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 C8AP07357 584 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 GLULP15104 373 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
PTPRU-210ENST00000527027 CDCA2Q69YH5 1023 aaPredicted RBP17.81■□□□□ 0.44
PTPRU-210ENST00000527027 PDXDC1Q6P996 788 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 MTSS1LQ765P7 747 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 MCPH1Q8NEM0 835 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 FGF13Q92913 245 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
PTPRU-210ENST00000527027 TDRD15B5MCY1 1934 aaKnown RBP17.8■□□□□ 0.44
PTPRU-210ENST00000527027 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
PTPRU-210ENST00000527027 TTLL13PA6NNM8 815 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 BTBD18B2RXH4 712 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 N4BP3O15049 544 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 CCL16O15467 120 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 ADAM12O43184 909 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 NEMFO60524 1076 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 XYLBO75191 536 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 SPATA31C1P0DKV0 1188 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
PTPRU-210ENST00000527027 SNW1Q13573 536 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms