RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CMASQ8NFW8 434 aaPredicted RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 FGF14Q92915 247 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 MCRS1Q96EZ8 462 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 CCDC43Q96MW1 224 aaKnown RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 CLSTN3Q9BQT9 956 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 PHF20Q9BVI0 1012 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 POLR3FQ9H1D9 316 aaPredicted RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 CHST7Q9NS84 486 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 HCFC1R1Q9NWW0 138 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 EPS15L1Q9UBC2 864 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ORC3Q9UBD5 711 aaPredicted RBP7.3□□□□□ -1.24
CD44-221ENST00000526000 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 GDAQ9Y2T3 454 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 GIT1Q9Y2X7 761 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 SPTBN4Q9H254 2564 aa7.3□□□□□ -1.24
CD44-221ENST00000526000 ANHXE9PGG2 379 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 I3L4J1 428 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 REC8O95072 547 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 C8AP07357 584 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 AXLP30530 894 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 OR1D2P34982 312 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 GUCY1B3Q02153 619 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
CD44-221ENST00000526000 MXD4Q14582 209 aaPredicted RBP7.29□□□□□ -1.24
CD44-221ENST00000526000 CALCRLQ16602 461 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 PPP4R3AQ6IN85 833 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 GALNT17Q6IS24 598 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 PPP4R3CPQ6ZMV5 832 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 HACE1Q8IYU2 909 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 RNF168Q8IYW5 571 aaPredicted RBP7.29□□□□□ -1.24
CD44-221ENST00000526000 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
CD44-221ENST00000526000 TTPALQ9BTX7 342 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 PLA2G2FQ9BZM2 168 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 PLEKHA4Q9H4M7 779 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 TTC12Q9H892 705 aaPredicted RBP7.29□□□□□ -1.24
CD44-221ENST00000526000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.24
CD44-221ENST00000526000 DPP7Q9UHL4 492 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 CDH7Q9ULB5 785 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 TPCN1Q9ULQ1 816 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 PCDHA12Q9UN75 941 aa7.29□□□□□ -1.24
CD44-221ENST00000526000 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 LAMTOR5O43504 91 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 KIF4AO95239 1232 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 EFEMP2O95967 443 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 GCFC2P16383 781 aaKnown RBP7.28□□□□□ -1.24
CD44-221ENST00000526000 XBP1P17861 261 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 BRCC3P46736 316 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 SPIRE1Q08AE8 756 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 PSMD5Q16401 504 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 LPAL2Q16609 132 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 RSPO4Q2I0M5 234 aaPredicted RBP7.28□□□□□ -1.24
CD44-221ENST00000526000 GLRA4Q5JXX5 417 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 LIN9Q5TKA1 542 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 PHLDB3Q6NSJ2 640 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 SLC27A1Q6PCB7 646 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 POTEHQ6S545 545 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 RSPO2Q6UXX9 243 aaPredicted RBP7.28□□□□□ -1.24
CD44-221ENST00000526000 ERMP1Q7Z2K6 904 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 SLFN12Q8IYM2 578 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 MAML2Q8IZL2 1156 aaPredicted RBP7.28□□□□□ -1.24
CD44-221ENST00000526000 PJA1Q8NG27 643 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 SLC7A14Q8TBB6 771 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 HDAC7Q8WUI4 952 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 RSPH1Q8WYR4 309 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 FGF13Q92913 245 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 NXPE3Q969Y0 559 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 HSD17B14Q9BPX1 270 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 KIFC3Q9BVG8 833 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 TMEM60Q9H2L4 133 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.28□□□□□ -1.24
CD44-221ENST00000526000 ANKEF1Q9NU02 776 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 ZDHHC7Q9NXF8 308 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 DLGAP2Q9P1A6 1054 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 FNIP2Q9P278 1114 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 DNMT3BQ9UBC3 853 aaKnown RBP7.28□□□□□ -1.24
CD44-221ENST00000526000 STK39Q9UEW8 545 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 NID2Q14112 1375 aa7.28□□□□□ -1.24
CD44-221ENST00000526000 GPR179Q6PRD1 2367 aa7.27□□□□□ -1.24
CD44-221ENST00000526000 DOCK6Q96HP0 2047 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 CACNA1IQ9P0X4 2223 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 A0A1B0GUA9 196 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 KANSL1LA0AUZ9 987 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 DCDC2BA2VCK2 349 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 PTGESO14684 152 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 TBX3O15119 743 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 JAK2O60674 1132 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 PFKFB2O60825 505 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 MED24O75448 989 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 DGAT1O75907 488 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 RECQL4O94761 1208 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 B3GAT3O94766 335 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 EDN1P05305 212 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 THP07101 528 aa7.27□□□□□ -1.25
CD44-221ENST00000526000 FDPSP14324 419 aaKnown RBP7.27□□□□□ -1.25
CD44-221ENST00000526000 MCM7P33993 719 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms