RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 NECAB1Q8N987 351 aa26.55■■□□□ 1.84
USP47-205ENST00000525257 ST13P5Q8NFI4 369 aaPredicted RBP26.55■■□□□ 1.84
USP47-205ENST00000525257 NXPE3Q969Y0 559 aa26.55■■□□□ 1.84
USP47-205ENST00000525257 PAAF1Q9BRP4 392 aa26.55■■□□□ 1.84
USP47-205ENST00000525257 TBC1D17Q9HA65 648 aa26.55■■□□□ 1.84
USP47-205ENST00000525257 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.55■■□□□ 1.84
USP47-205ENST00000525257 NEMFO60524 1076 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 C1RP00736 705 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 LAMP2P13473 410 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 FOSBP53539 338 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 CREMQ03060 361 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 HSP90AA2PQ14568 343 aaPredicted RBP26.54■■□□□ 1.84
USP47-205ENST00000525257 RTP2Q5QGT7 225 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 POTEGQ6S5H5 508 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 GPR65Q8IYL9 337 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 GPR152Q8TDT2 470 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 HASPINQ8TF76 798 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 ZMYM2Q9UBW7 1377 aa26.54■■□□□ 1.84
USP47-205ENST00000525257 ZNF292O60281 2723 aa26.53■■□□□ 1.84
USP47-205ENST00000525257 POTEMA6NI47 508 aa26.53■■□□□ 1.84
USP47-205ENST00000525257 SF3B1O75533 1304 aaKnown RBP eCLIP26.53■■□□□ 1.84
USP47-205ENST00000525257 CASTOR2A6NHX0 329 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 BTBD18B2RXH4 712 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 ZMYND10O75800 440 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 HTR4Q13639 388 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 ANKRD1Q15327 319 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 SPECC1Q5M775 1068 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 PRMT7Q9NVM4 692 aaPredicted RBP26.52■■□□□ 1.84
USP47-205ENST00000525257 NUMBLQ9Y6R0 609 aa26.52■■□□□ 1.84
USP47-205ENST00000525257 LARGE1O95461 756 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 TUSC3Q13454 348 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 PPP4R3CPQ6ZMV5 832 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 DIS3L2Q8IYB7 885 aaKnown RBP26.51■■□□□ 1.83
USP47-205ENST00000525257 MTMR9Q96QG7 549 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 ARHGEF3Q9NR81 526 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 DOCK6Q96HP0 2047 aa26.51■■□□□ 1.83
USP47-205ENST00000525257 DCHS1Q96JQ0 3298 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 TTLL13PA6NNM8 815 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 ANHXE9PGG2 379 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 KIF4AO95239 1232 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 FSHRP23945 695 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 FOXK2Q01167 660 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 TMEM132AQ24JP5 1023 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 FAM171A1Q5VUB5 890 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 GRASPQ7Z6J2 395 aaPredicted RBP26.5■■□□□ 1.83
USP47-205ENST00000525257 CEP57Q86XR8 500 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 ZBTB8OSQ8IWT0 167 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 GTF3C6Q969F1 213 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 PRIMPOLQ96LW4 560 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 SNTG2Q9NY99 539 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 FBXW11Q9UKB1 542 aa26.5■■□□□ 1.83
USP47-205ENST00000525257 DCNP07585 359 aaKnown RBP26.49■■□□□ 1.83
USP47-205ENST00000525257 SPATA31C1P0DKV0 1188 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 XRCC6P12956 609 aaKnown RBP eCLIP26.49■■□□□ 1.83
USP47-205ENST00000525257 PSMD5Q16401 504 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 ME3Q16798 604 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 CDCA2Q69YH5 1023 aaPredicted RBP26.49■■□□□ 1.83
USP47-205ENST00000525257 NSUN7Q8NE18 718 aaKnown RBP26.49■■□□□ 1.83
USP47-205ENST00000525257 MCPH1Q8NEM0 835 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 KCNG4Q8TDN1 519 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 CLSTN3Q9BQT9 956 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 TTPALQ9BTX7 342 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 CXCL16Q9H2A7 254 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 TMEM60Q9H2L4 133 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 FZD8Q9H461 694 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 PDZD7Q9H5P4 517 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 R4GN57 208 aa26.49■■□□□ 1.83
USP47-205ENST00000525257 EP300Q09472 2414 aaPredicted RBP26.48■■□□□ 1.83
USP47-205ENST00000525257 PTGESO14684 152 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 ATP2B1P20020 1258 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 NTHL1P78549 312 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 LIN9Q5TKA1 542 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 PHLDB3Q6NSJ2 640 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 PIK3R5Q8WYR1 880 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 USP20Q9Y2K6 914 aa26.48■■□□□ 1.83
USP47-205ENST00000525257 MYH15Q9Y2K3 1946 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 N4BP3O15049 544 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 JAK2O60674 1132 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 MED24O75448 989 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 RECQL4O94761 1208 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 THP07101 528 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 LIG1P18858 919 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 ID4P47928 161 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 TRIM29Q14134 588 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 FAM187BQ17R55 369 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 DCLRE1AQ6PJP8 1040 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 CATSPER3Q86XQ3 398 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 LNX1Q8TBB1 728 aaPredicted RBP26.47■■□□□ 1.83
USP47-205ENST00000525257 BSNDQ8WZ55 320 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 FGF14Q92915 247 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 RPP25Q9BUL9 199 aaKnown RBP26.47■■□□□ 1.83
USP47-205ENST00000525257 TUFT1Q9NNX1 390 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 SLC2A4RGQ9NR83 387 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 SIT1Q9Y3P8 196 aa26.47■■□□□ 1.83
USP47-205ENST00000525257 VWA8A3KMH1 1905 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 C8AP07357 584 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 MCM7P33993 719 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 ANAPC15P60006 121 aa26.46■■□□□ 1.83
USP47-205ENST00000525257 PRPF4BQ13523 1007 aaKnown RBP26.46■■□□□ 1.83
USP47-205ENST00000525257 PPM1LQ5SGD2 360 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms