RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 DNM3Q9UQ16 869 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 C2CD2LO14523 706 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 TEX28O15482 410 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 BRD1O95696 1058 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 LIG1P18858 919 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 KLRC2P26717 231 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 NPTX2P47972 431 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 NASPP49321 788 aaPredicted RBP13.81□□□□□ -0.2
SMCO4-202ENST00000525141 ZXDAP98168 799 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 ITIH3Q06033 890 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 PKP1Q13835 747 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
SMCO4-202ENST00000525141 SLC39A14Q15043 492 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 MAPK6Q16659 721 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
SMCO4-202ENST00000525141 KRT79Q5XKE5 535 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 KIFAP3Q92845 792 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 PLIN2Q99541 437 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 NTPCRQ9BSD7 190 aaKnown RBP13.81□□□□□ -0.2
SMCO4-202ENST00000525141 COLEC11Q9BWP8 271 aa13.81□□□□□ -0.2
SMCO4-202ENST00000525141 MRPL17Q9NRX2 175 aaKnown RBP13.81□□□□□ -0.2
SMCO4-202ENST00000525141 K7ERI5 159 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 ABLIM1O14639 778 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 N4BP3O15049 544 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
SMCO4-202ENST00000525141 SLC26A4O43511 780 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 HIP1RO75146 1068 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 SRGAP2BP0DMP2 458 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
SMCO4-202ENST00000525141 PEX3P56589 373 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 DSG1Q02413 1049 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 GRIN1Q05586 938 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 ALKAL1Q6UXT8 129 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 HFE2Q6ZVN8 426 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 SYT2Q8N9I0 419 aaPredicted RBP13.8□□□□□ -0.2
SMCO4-202ENST00000525141 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 ACO2Q99798 780 aaKnown RBP13.8□□□□□ -0.2
SMCO4-202ENST00000525141 TMEM134Q9H6X4 195 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 ZDHHC9Q9Y397 364 aa13.8□□□□□ -0.2
SMCO4-202ENST00000525141 SRPRBQ9Y5M8 271 aaKnown RBP13.8□□□□□ -0.2
SMCO4-202ENST00000525141 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 C2CD4DB7Z1M9 353 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 RECQL4O94761 1208 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 MYBP10242 640 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 EFNA5P52803 228 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 GRIK3Q13003 919 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 CES5AQ6NT32 575 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 TRIM67Q6ZTA4 783 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 GPR149Q86SP6 731 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 PPFIBP1Q86W92 1011 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 CEP120Q8N960 986 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 LINC00301Q8NCQ3 95 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 ZBTB45Q96K62 511 aaPredicted RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 IFT74Q96LB3 600 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 EMILIN2Q9BXX0 1053 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 TFIP11Q9UBB9 837 aaKnown RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 CFAP45Q9UL16 551 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 TNFSF13BQ9Y275 285 aa13.79□□□□□ -0.2
SMCO4-202ENST00000525141 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
SMCO4-202ENST00000525141 DOCK6Q96HP0 2047 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 PPP6R2O75170 966 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 YEATS4O95619 227 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 PROZP22891 400 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 DDIT3P35638 169 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 UBA7P41226 1012 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 MTHFRP42898 656 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 GLUD2P49448 558 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 NUCB2P80303 420 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 TUSC3Q13454 348 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 TMEM119Q4V9L6 283 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 BMP8AQ7Z5Y6 402 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 CABP7Q86V35 215 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms