RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ZKSCAN5Q9Y2L8 839 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 TBX22Q9Y458 520 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 EID1Q9Y6B2 187 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 XDHP47989 1333 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 PTCH1Q13635 1447 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 NKTRP30414 1462 aaKnown RBP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 TULP4Q9NRJ4 1543 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 PPP1R12AO14974 1030 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 GAS7O60861 476 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 RAMP2O60895 175 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 PPFIA4O75335 1185 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 GNAT2P19087 354 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 CD40P25942 277 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 NPEPPSP55786 919 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 LRRC32Q14392 662 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 RABL3Q5HYI8 236 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 C1QL3Q5VWW1 255 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 APBB1IPQ7Z5R6 666 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 ELOA2Q8IYF1 753 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 UNC5BQ8IZJ1 945 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 EFHBQ8N7U6 833 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 SLC25A43Q8WUT9 341 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 ATXN2LQ8WWM7 1075 aaKnown RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 RTF1Q92541 710 aaKnown RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 UIMC1Q96RL1 719 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 MNTQ99583 582 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 NOL10Q9BSC4 688 aaKnown RBP4.1□□□□□ -1.75
CSDE1-208ENST00000524652 MYL10Q9BUA6 226 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 TOMM22Q9NS69 142 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 OXSMQ9NWU1 459 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 DMRT1Q9Y5R6 373 aa4.1□□□□□ -1.75
CSDE1-208ENST00000524652 ITSN1Q15811 1721 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 AKAP12Q02952 1782 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 A0A0A6YYK5 440 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-208ENST00000524652 TMEM191CA6NGB0 347 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 APOL3O95236 402 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ASMTLO95671 621 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 F2P00734 622 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.75
CSDE1-208ENST00000524652 KRT4P19013 534 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 POU3F2P20265 443 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-208ENST00000524652 DSG1Q02413 1049 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 TCEA2Q15560 299 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 METTL24Q5JXM2 366 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 UNQ6494/PRO21346Q6UXR6 183 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 Q6ZPA2 131 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 MRGPREQ86SM8 312 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 MB21D1Q8N884 522 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ST8SIA2Q92186 375 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 HAS1Q92839 578 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 LENG9Q96B70 501 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 AGAP2Q99490 1192 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 SOX7Q9BT81 388 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ZSWIM4Q9H7M6 989 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ZMAT4Q9H898 229 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 KANSL2Q9H9L4 492 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 NCDNQ9UBB6 729 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 TRPS1Q9UHF7 1281 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ROCK2O75116 1388 aaKnown RBP4.09□□□□□ -1.75
CSDE1-208ENST00000524652 LRPPRCP42704 1394 aaKnown RBP4.09□□□□□ -1.75
CSDE1-208ENST00000524652 ABCC11Q96J66 1382 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 PIK3R4Q99570 1358 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 CDC42BPGQ6DT37 1551 aa4.09□□□□□ -1.75
CSDE1-208ENST00000524652 NHSL1Q5SYE7 1610 aa4.09□□□□□ -1.76
CSDE1-208ENST00000524652 ROBO1Q9Y6N7 1651 aa4.09□□□□□ -1.76
CSDE1-208ENST00000524652 MARF1Q9Y4F3 1742 aaKnown RBP4.09□□□□□ -1.76
CSDE1-208ENST00000524652 FOXN1O15353 648 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 GAAP10253 952 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 NANOS3P60323 173 aaKnown RBP4.08□□□□□ -1.76
CSDE1-208ENST00000524652 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 FAM135BQ49AJ0 1406 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 IQSEC2Q5JU85 1478 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 RHOUQ7L0Q8 258 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 MON2Q7Z3U7 1717 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 MYPNQ86TC9 1320 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 PASD1Q8IV76 773 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 RPUSD2Q8IZ73 545 aaKnown RBP4.08□□□□□ -1.76
CSDE1-208ENST00000524652 SYNE4Q8N205 404 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 ZNF276Q8N554 614 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 CDYL2Q8N8U2 506 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 PGBD4Q96DM1 585 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 PDCD2LQ9BRP1 358 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 ENKD1Q9H0I2 346 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 NRDE2Q9H7Z3 1164 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 IFT57Q9NWB7 429 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 STK26Q9P289 416 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 PCDHB6Q9Y5E3 794 aa4.08□□□□□ -1.76
CSDE1-208ENST00000524652 TRPM3Q9HCF6 1732 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-208ENST00000524652 CRYBG1Q9Y4K1 1723 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 NRKQ7Z2Y5 1582 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 ATP7BP35670 1465 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 ADGRL3Q9HAR2 1447 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 USP47Q96K76 1375 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 ST20-MTHFSA0A0A6YYL1 179 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 GRXCR1A8MXD5 290 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 FAM20BO75063 409 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 RPS6KA4O75676 772 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 GPR15P49685 360 aa4.07□□□□□ -1.76
CSDE1-208ENST00000524652 WNT3AP56704 352 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms