RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 ZNF568Q3ZCX4 644 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 SUPT20HL1Q3ZLR7 823 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 ANKMY2Q8IV38 441 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 NLRP7Q8WX94 980 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 SNF8Q96H20 258 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 RBM41Q96IZ5 413 aaKnown RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 HAUS2Q9NVX0 235 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 ARSEP51690 589 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 ZNF720Q7Z2F6 126 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 FAM151AQ8WW52 585 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 SLC35C1Q96A29 364 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 SEC16BQ96JE7 1060 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 XPO6Q96QU8 1125 aaKnown RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 JPH1Q9HDC5 661 aaPredicted RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 KLC4Q9NSK0 619 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 SLC9A2Q9UBY0 812 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 CPP00450 1065 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 PSMC1P62191 440 aaKnown RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 KCNMA1Q12791 1236 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 LRRC55Q6ZSA7 311 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 PDCD7Q8N8D1 485 aaKnown RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 ATL2Q8NHH9 583 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 ZDHHC15Q96MV8 337 aa18.61■□□□□ 0.57
MACF1-227ENST00000524432 FAM49AQ9H0Q0 323 aaPredicted RBP18.61■□□□□ 0.57
MACF1-227ENST00000524432 ZBED1O96006 694 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 GCKP35557 465 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ZC3H18Q86VM9 953 aaKnown RBP18.6■□□□□ 0.57
MACF1-227ENST00000524432 RIT2Q99578 217 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ETNK1Q9HBU6 452 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ERFP50548 548 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
MACF1-227ENST00000524432 TMEM119Q4V9L6 283 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
MACF1-227ENST00000524432 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.6■□□□□ 0.572e-7■■■■■ 34
MACF1-227ENST00000524432 MAML1Q92585 1016 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 F8VZ95 297 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 MYCBPAPQ8TBZ2 947 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 PPP4R1Q8TF05 950 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 AIPL1Q9NZN9 384 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 G3BP2Q9UN86 482 aaKnown RBP18.6■□□□□ 0.57
MACF1-227ENST00000524432 MED7O43513 233 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 FAM107AO95990 144 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ANXA13P27216 316 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ERVK-9P63128 1117 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 FAM47CQ5HY64 1035 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 APOBEC3HQ6NTF7 200 aaKnown RBP18.6■□□□□ 0.57
MACF1-227ENST00000524432 CCHCR1Q8TD31 782 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 ZNF384Q8TF68 577 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 SMYD2Q9NRG4 433 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 PPP1R9AQ9ULJ8 1098 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 USP20Q9Y2K6 914 aa18.6■□□□□ 0.57
MACF1-227ENST00000524432 UBE4BO95155 1302 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 SOX10P56693 466 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 NXNQ6DKJ4 435 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 KCNV2Q8TDN2 545 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 PSPC1Q8WXF1 523 aaKnown RBP18.59■□□□□ 0.57
MACF1-227ENST00000524432 FAF2Q96CS3 445 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 DNAJC19Q96DA6 116 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 RBM15Q96T37 977 aaKnown RBP eCLIP18.59■□□□□ 0.57
MACF1-227ENST00000524432 MIS12Q9H081 205 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 PIM2Q9P1W9 311 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.57
MACF1-227ENST00000524432 NFIBO00712 420 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 C4orf33Q8N1A6 199 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 ACSF2Q96CM8 615 aaPredicted RBP18.59■□□□□ 0.57
MACF1-227ENST00000524432 TARS2Q9BW92 718 aaKnown RBP18.59■□□□□ 0.57
MACF1-227ENST00000524432 UVRAGQ9P2Y5 699 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 TOM1L1O75674 476 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 MYO1EQ12965 1108 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 NPY5RQ15761 445 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 ECM1Q16610 540 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 WDR72Q3MJ13 1102 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 LRIG3Q6UXM1 1119 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 DPP9Q86TI2 863 aa18.59■□□□□ 0.57
MACF1-227ENST00000524432 DHX38Q92620 1227 aaKnown RBP18.59■□□□□ 0.57
MACF1-227ENST00000524432 TISP43B9A030 160 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 ARL4CP56559 192 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 AMPD2Q01433 879 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 ATG4CQ96DT6 458 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 IKZF4Q9H2S9 585 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 HOXC10Q9NYD6 342 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.57
MACF1-227ENST00000524432 MAPK13O15264 365 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 CAND2O75155 1236 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 DGAT1O75907 488 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 MAPK7Q13164 816 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.57
MACF1-227ENST00000524432 P3H1Q32P28 736 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.57
MACF1-227ENST00000524432 TOPORSQ9NS56 1045 aaPredicted RBP18.58■□□□□ 0.57
MACF1-227ENST00000524432 FGFR1OP2Q9NVK5 253 aa18.58■□□□□ 0.57
MACF1-227ENST00000524432 ATRNO75882 1429 aa18.58■□□□□ 0.56
MACF1-227ENST00000524432 HLA-DRAP01903 254 aa18.58■□□□□ 0.56
MACF1-227ENST00000524432 PPM1NQ8N819 430 aa18.58■□□□□ 0.56
MACF1-227ENST00000524432 DNAAF3Q8N9W5 541 aa18.58■□□□□ 0.56
MACF1-227ENST00000524432 AKAP12Q02952 1782 aa18.58■□□□□ 0.56
MACF1-227ENST00000524432 SLITRK3O94933 977 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms