RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	PNMA5	Q96PV4	448 aa		13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	TCHP	Q9BT92	498 aa		13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	LRFN3	Q9BTN0	628 aa		13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	CCDC94	Q9BW85	323 aa	Predicted RBP	13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	LARS	Q9P2J5	1176 aa	Known RBP	13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	USP20	Q9Y2K6	914 aa		13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	GDA	Q9Y2T3	454 aa		13.84	□□□□□ -0.19
RBBP4-215	ENST00000524393	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	2e-11	■■■■■ 38.3
RBBP4-215	ENST00000524393	FAM86C2P	A6NEL3	165 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	PRR33	A8MZF0	331 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393		K7ELQ4	463 aa	Predicted RBP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	CNP	P09543	421 aa	Known RBP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	PLS3	P13797	630 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	EPCAM	P16422	314 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	USP41	Q3LFD5	358 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	TMEM119	Q4V9L6	283 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	ATAT1	Q5SQI0	421 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	RARS2	Q5T160	578 aa	Known RBP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	NT5DC1	Q5TFE4	455 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	FUT10	Q6P4F1	479 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	DAW1	Q8N136	415 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	SLC22A17	Q8WUG5	538 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	FBXL18	Q96ME1	805 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	SFXN1	Q9H9B4	322 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	ARHGAP28	Q9P2N2	729 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	MUTYH	Q9UIF7	546 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	HCN4	Q9Y3Q4	1203 aa		13.83	□□□□□ -0.2
RBBP4-215	ENST00000524393	CASTOR2	A6NHX0	329 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	SFI1	A8K8P3	1242 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	SLC16A4	O15374	487 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	EDN1	P05305	212 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	KRT18	P05783	430 aa	Known RBP	13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	SYT1	P21579	422 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	CLCN4	P51793	760 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	SLC12A3	P55017	1021 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	DSG1	Q02413	1049 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	ELAVL2	Q12926	359 aa	Known RBP	13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	MAPK7	Q13164	816 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	GPR65	Q8IYL9	337 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	RNF168	Q8IYW5	571 aa	Predicted RBP	13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	SPIRE2	Q8WWL2	714 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	ACO2	Q99798	780 aa	Known RBP	13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	NTPCR	Q9BSD7	190 aa	Known RBP	13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	TSHZ2	Q9NRE2	1034 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393	ODF2L	Q9ULJ1	636 aa		13.82	□□□□□ -0.2
RBBP4-215	ENST00000524393		F8W810	466 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	PTGES	O14684	152 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	LILRB3	O75022	631 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	GLUD1	P00367	558 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	MCF2	P10911	925 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	SCP2	P22307	547 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	TXLNA	P40222	546 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	GRM5	P41594	1212 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	KIAA0319	Q5VV43	1072 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	MPZL3	Q6UWV2	235 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	TAS1R1	Q7RTX1	841 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	ZBTB33	Q86T24	672 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	GPBP1	Q86WP2	473 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	C12orf76	Q8N812	135 aa	Predicted RBP	13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	RIN2	Q8WYP3	895 aa	Predicted RBP	13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	RABGGTA	Q92696	567 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	UROC1	Q96N76	676 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	TARS2	Q9BW92	718 aa	Known RBP	13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	CDT1	Q9H211	546 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	POMK	Q9H5K3	350 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	CHST7	Q9NS84	486 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	CCDC39	Q9UFE4	941 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	BDP1	A6H8Y1	2624 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	NCOR1	O75376	2440 aa		13.81	□□□□□ -0.2
RBBP4-215	ENST00000524393	MYH11	P35749	1972 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	TEX28	O15482	410 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	FAM13A	O94988	1023 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	EFEMP2	O95967	443 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	HARS	P12081	509 aa	Known RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	PLCG1	P19174	1290 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	SP100	P23497	879 aa	Predicted RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	ABCD1	P33897	745 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	MATR3	P43243	847 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	OSTN	P61366	133 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	DHX8	Q14562	1220 aa	Known RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	KARS	Q15046	597 aa	Known RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	PDXDC1	Q6P996	788 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	TMC5	Q6UXY8	1006 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	ZPBP2	Q6X784	338 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	CEP57	Q86XR8	500 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	TDRD5	Q8NAT2	981 aa	Known RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	HASPIN	Q8TF76	798 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	BICD1	Q96G01	975 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	ACAP3	Q96P50	834 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	GPR62	Q9BZJ7	368 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	RXFP1	Q9HBX9	757 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	C11orf16	Q9NQ32	467 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	MAN1C1	Q9NR34	630 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	FOXD4L1	Q9NU39	408 aa		13.8	□□□□□ -0.2
RBBP4-215	ENST00000524393	SLC38A7	Q9NVC3	462 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms