RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 ADAM28Q9UKQ2 775 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 IPPQ9Y573 584 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SF3B1O75533 1304 aaKnown RBP eCLIP10.39□□□□□ -0.754e-6■■■■■ 79
PTPN12-216ENST00000523952 COL4A2P08572 1712 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 ATRXP46100 2492 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 KLF18A0A0U1RQI7 1052 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 ESYT2A0FGR8 921 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 MAN2B1O00754 1011 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CIITAP33076 1130 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CCR3P51677 355 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PSMD5Q16401 504 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 AASDHQ4L235 1098 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PABPC1LQ4VXU2 614 aaKnown RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PLA2G4FQ68DD2 849 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 NOTUMQ6P988 496 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PRR23CQ6ZRP0 262 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 GPR65Q8IYL9 337 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 TCP11Q8WWU5 503 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 ING5Q8WYH8 240 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 SLC5A5Q92911 643 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CLDN23Q96B33 292 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 IFT122Q9HBG6 1241 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 PRMT8Q9NR22 394 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 SH2B1Q9NRF2 756 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 HEBP1Q9NRV9 189 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 CHST7Q9NS84 486 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 SEMA4GQ9NTN9 838 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 FBXW11Q9UKB1 542 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 MRPS23Q9Y3D9 190 aaKnown RBP10.39□□□□□ -0.75
PTPN12-216ENST00000523952 SDK1Q7Z5N4 2213 aa10.39□□□□□ -0.75
PTPN12-216ENST00000523952 NUP210Q8TEM1 1887 aaPredicted RBP10.38□□□□□ -0.75
PTPN12-216ENST00000523952 F8W810 466 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 PAPLNO95428 1278 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 TGM1P22735 817 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 AXLP30530 894 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 USP11P51784 963 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 PSMC5P62195 406 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 DSC1Q08554 894 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 CSRP2Q16527 193 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 UBXN11Q5T124 520 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 CREB3L3Q68CJ9 461 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 PDXDC1Q6P996 788 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 CEP68Q76N32 757 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 RNF168Q8IYW5 571 aaPredicted RBP10.38□□□□□ -0.75
PTPN12-216ENST00000523952 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
PTPN12-216ENST00000523952 ITFG1Q8TB96 612 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 SLC7A14Q8TBB6 771 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 PRPF31Q8WWY3 499 aaKnown RBP10.38□□□□□ -0.75
PTPN12-216ENST00000523952 NELL1Q92832 810 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 GJA10Q969M2 543 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 LENG9Q96B70 501 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 CEP170P1Q96L14 293 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 MBOAT7Q96N66 472 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 IER2Q9BTL4 223 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 GPR62Q9BZJ7 368 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 BRD9Q9H8M2 597 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 HES2Q9Y543 173 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 F5P12259 2224 aa10.38□□□□□ -0.75
PTPN12-216ENST00000523952 INO80B-WBP1J3KQ70 363 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 ASAP2O43150 1006 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 HOXA9P31269 272 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 RFC5P40937 340 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 LAMTOR4Q0VGL1 99 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 FUT2Q10981 343 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 GRIK3Q13003 919 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 PCBP1Q15365 356 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 AXDND1Q5T1B0 1012 aaPredicted RBP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 FAM171A1Q5VUB5 890 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 NPAS3Q8IXF0 933 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 C12orf50Q8NA57 414 aaPredicted RBP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 HASPINQ8TF76 798 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 RABGGTAQ92696 567 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 DNASE1L2Q92874 299 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 MCRS1Q96EZ8 462 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 CPB2Q96IY4 423 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 TCEANC2Q96MN5 208 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 EIF2AQ9BY44 585 aaKnown RBP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 MINDY3Q9H8M7 445 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 ANO2Q9NQ90 1003 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 HCFC1R1Q9NWW0 138 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
PTPN12-216ENST00000523952 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 BRPF3Q9ULD4 1205 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 GIT1Q9Y2X7 761 aa10.37□□□□□ -0.75
PTPN12-216ENST00000523952 THADAQ6YHU6 1953 aa10.36□□□□□ -0.75
PTPN12-216ENST00000523952 MARCH6O60337 910 aa10.36□□□□□ -0.75
PTPN12-216ENST00000523952 ECI2O75521 394 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms