RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SHCBP1Q8NEM2 672 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 REPS2Q8NFH8 660 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 OR7D4Q8NG98 312 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 OR5M3Q8NGP4 307 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 C8orf48Q96LL4 319 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 LDAHQ9H6V9 325 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 BCO1Q9HAY6 547 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 OAZ3Q9UMX2 235 aa6.36□□□□□ -1.39
SKP1-211ENST00000523359 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 NRP1O14786 923 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 CR2P20023 1033 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 CRHR1P34998 444 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 SREBF1P36956 1147 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 PGS1Q32NB8 556 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 GFOD2Q3B7J2 385 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 ATAT1Q5SQI0 421 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 PALM2Q8IXS6 379 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 FBXO18Q8NFZ0 1043 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 SLC35G2Q8TBE7 412 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 MDM1Q8TC05 714 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 CCHCR1Q8TD31 782 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 MVB12AQ96EY5 273 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 MAP3K14Q99558 947 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 PDCD2LQ9BRP1 358 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 KLC2Q9H0B6 622 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 AGO3Q9H9G7 860 aaKnown RBP6.35□□□□□ -1.39
SKP1-211ENST00000523359 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 CD248Q9HCU0 757 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 IL23AQ9NPF7 189 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
SKP1-211ENST00000523359 A0A1W2PRX2 142 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 UBE2QL1A1L167 161 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 VSTM5A8MXK1 200 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 GASTP01350 101 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 PTPN7P35236 360 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 PRAMEF14Q5SWL7 426 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
SKP1-211ENST00000523359 TAX1BP1Q86VP1 789 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 GPR135Q8IZ08 494 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 TRMT2AQ8IZ69 625 aaKnown RBP6.34□□□□□ -1.39
SKP1-211ENST00000523359 SLC16A11Q8NCK7 471 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 DIS3LQ8TF46 1054 aaKnown RBP6.34□□□□□ -1.39
SKP1-211ENST00000523359 CCDC136Q96JN2 1154 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 TAAR9Q96RI9 348 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 CDC5LQ99459 802 aaKnown RBP6.34□□□□□ -1.39
SKP1-211ENST00000523359 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
SKP1-211ENST00000523359 ENKD1Q9H0I2 346 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 MEGF9Q9H1U4 602 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 MANSC1Q9H8J5 431 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 LANCL2Q9NS86 450 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 TSC22D4Q9Y3Q8 395 aa6.34□□□□□ -1.39
SKP1-211ENST00000523359 ZMYM3Q14202 1370 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 PMS2P1A4D2B8 440 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 MYBP10242 640 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 NPEPPSP55786 919 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 TARDBPQ13148 414 aaKnown RBP eCLIP6.33□□□□□ -1.4
SKP1-211ENST00000523359 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 CCDC181Q5TID7 509 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 SLFN13Q68D06 897 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 TMED8Q6PL24 325 aaPredicted RBP6.33□□□□□ -1.4
SKP1-211ENST00000523359 DNERQ8NFT8 737 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 STON2Q8WXE9 905 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 GNRHR2Q96P88 292 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 PLA2G12BQ9BX93 195 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 DEF6Q9H4E7 631 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 TDP1Q9NUW8 608 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
SKP1-211ENST00000523359 CFAP20Q9Y6A4 193 aaKnown RBP6.33□□□□□ -1.4
SKP1-211ENST00000523359 WNT10BO00744 389 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 STC2O76061 302 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 C6P13671 934 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 GZMKP49863 264 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 APBA1Q02410 837 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 DSC2Q02487 901 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 DUSP8Q13202 625 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 PDZD4Q76G19 769 aaPredicted RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 RSPH3Q86UC2 560 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 ZGPATQ8N5A5 531 aaKnown RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 IL17RAQ96F46 866 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 TMEM176AQ96HP8 235 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 TMX3Q96JJ7 454 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 OR14A2Q96R54 314 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 ACO2Q99798 780 aaKnown RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 TCF25Q9BQ70 676 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 OBP2AQ9NY56 170 aa6.32□□□□□ -1.4
SKP1-211ENST00000523359 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
SKP1-211ENST00000523359 MYBBP1AQ9BQG0 1328 aaKnown RBP6.31□□□□□ -1.4
SKP1-211ENST00000523359 PLEKHD1A6NEE1 506 aa6.31□□□□□ -1.4
SKP1-211ENST00000523359 KIF3BO15066 747 aa6.31□□□□□ -1.4
SKP1-211ENST00000523359 SGTAO43765 313 aa6.31□□□□□ -1.4
SKP1-211ENST00000523359 CTNND1O60716 968 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms