RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FBXO15Q8NCQ5 510 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-210ENST00000522843 SMRP1Q8NCR6 262 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 AFG1LQ8WV93 481 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 RMDN1Q96DB5 314 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 IRF2BPLQ9H1B7 796 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 CARS2Q9HA77 564 aaKnown RBP7.83□□□□□ -1.16
SDCBP-210ENST00000522843 IL1RAPL2Q9NP60 686 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 INCENPQ9NQS7 918 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 EXOC6BQ9Y2D4 811 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 BAHCC1Q9P281 2608 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 CHD6Q8TD26 2715 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 SPTBN2O15020 2390 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.163e-7■■■■□ 24.1
SDCBP-210ENST00000522843 PLA2G6O60733 806 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 CSPG5O95196 566 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 EOMESO95936 686 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 CT47B1P0C2W7 299 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-210ENST00000522843 TXNP10599 105 aaKnown RBP7.82□□□□□ -1.16
SDCBP-210ENST00000522843 NME2P22392 152 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 MCCP23508 829 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 GDNFP39905 211 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 ARHGAP1Q07960 439 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 PPM1JQ5JR12 505 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 TMCO4Q5TGY1 634 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 KCTD1Q719H9 257 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 ADGRD2Q7Z7M1 963 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 CLEC4DQ8WXI8 215 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 YME1L1Q96TA2 773 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 EPB41L4AQ9HCS5 686 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-210ENST00000522843 ARPP21Q9UBL0 812 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-210ENST00000522843 SYNPO2Q9UMS6 1093 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 USP15Q9Y4E8 981 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-210ENST00000522843 PLIN4Q96Q06 1357 aa7.82□□□□□ -1.16
SDCBP-210ENST00000522843 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 HAS3O00219 553 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 TTLL1O95922 423 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 ICAM1P05362 532 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 ICAM3P32942 547 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 NTF4P34130 210 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 CTNNB1P35222 781 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 BMPR1AP36894 532 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 RBM10P98175 930 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 ZNF252P-AS1Q0IIN9 211 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 COASYQ13057 564 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 UBE3CQ15386 1083 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 PTPN21Q16825 1174 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 BRDTQ58F21 947 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 FAM160B2Q86V87 743 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 AMOTL1Q8IY63 956 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 SCFD2Q8WU76 684 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 CHURC1Q8WUH1 139 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 RPGRIP1Q96KN7 1286 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 RIPOR3Q96MK2 946 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 STRBPQ96SI9 672 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 ALG1Q9BT22 464 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 PHF7Q9BWX1 381 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 FOXQ1Q9C009 403 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 LMAN2LQ9H0V9 348 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 RANBP17Q9H2T7 1088 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 C19orf73Q9NVV2 129 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 PAG1Q9NWQ8 432 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 CACNA2D2Q9NY47 1150 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 ADD3Q9UEY8 706 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 CCPG1Q9ULG6 757 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 MAP1BP46821 2468 aaKnown RBP7.81□□□□□ -1.16
SDCBP-210ENST00000522843 MYH7P12883 1935 aa7.81□□□□□ -1.16
SDCBP-210ENST00000522843 RAD50Q92878 1312 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 FRYLO94915 3013 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 F2P00734 622 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 MMP1P03956 469 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 TMEM253P0C7T8 217 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 CALML3P27482 149 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 SLC1A4P43007 532 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 NDUFV1P49821 464 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 PDE4BQ07343 736 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 LY6KQ17RY6 165 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 TTBK2Q6IQ55 1244 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 CEP85Q6P2H3 762 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 NPAS4Q8IUM7 802 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 EFHBQ8N7U6 833 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 VN1R2Q8NFZ6 395 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 FBF1Q8TES7 1133 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 SUSD6Q92537 303 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 NKD2Q969F2 451 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-210ENST00000522843 DIRC2Q96SL1 478 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 BOLA2Q9H3K6 86 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 SMOC2Q9H3U7 446 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 BARX2Q9UMQ3 279 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-210ENST00000522843 MAPK8IP1Q9UQF2 711 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 CHD8Q9HCK8 2581 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
SDCBP-210ENST00000522843 MYO10Q9HD67 2058 aa7.79□□□□□ -1.16
SDCBP-210ENST00000522843 USP24Q9UPU5 2620 aa7.79□□□□□ -1.16
SDCBP-210ENST00000522843 PTPDC1A2A3K4 754 aa7.79□□□□□ -1.16
SDCBP-210ENST00000522843 RSPH10B2B2RC85 870 aa7.79□□□□□ -1.16
SDCBP-210ENST00000522843 NPIPB6E9PJ23 425 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms