RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 C1RP00736 705 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 GLULP15104 373 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 NTHL1P78549 312 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 NCBP1Q09161 790 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 SLC27A1Q6PCB7 646 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 ELMSAN1Q6PJG2 1045 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 GPR65Q8IYL9 337 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 HASPINQ8TF76 798 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 NXPE3Q969Y0 559 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 NAP1L4Q99733 375 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 POLR3FQ9H1D9 316 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■■□ 26.7
TRAPPC9-213ENST00000522504 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 PARP2Q9UGN5 583 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 USP20Q9Y2K6 914 aa16.95■□□□□ 0.3
TRAPPC9-213ENST00000522504 ADAM12O43184 909 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 LRRN2O75325 713 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 ZMYND10O75800 440 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 IGFBP6P24592 240 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 ID4P47928 161 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 GRIK3Q13003 919 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 PARM1Q6UWI2 310 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 GRASPQ7Z6J2 395 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 FGF14Q92915 247 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 CLSTN3Q9BQT9 956 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 FOXQ1Q9C009 403 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 TTC12Q9H892 705 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 ARHGEF3Q9NR81 526 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 OTOGLQ3ZCN5 2332 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 DOCK6Q96HP0 2047 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
TRAPPC9-213ENST00000522504 CASTOR2A6NHX0 329 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 POTEMA6NI47 508 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 PTGESO14684 152 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 USO1O60763 962 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 TADA2AO75478 443 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 KIF4AO95239 1232 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 XBP1P17861 261 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 KRT2P35908 639 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 NAB2Q15742 525 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 CALCRLQ16602 461 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 PHLDB3Q6NSJ2 640 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 HACE1Q8IYU2 909 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 LNX1Q8TBB1 728 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 KCNG4Q8TDN1 519 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 MTMR9Q96QG7 549 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 SLC2A4RGQ9NR83 387 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 FBXW11Q9UKB1 542 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
TRAPPC9-213ENST00000522504 CEP250Q9BV73 2442 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 TDRD15B5MCY1 1934 aaKnown RBP16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 NCOR2Q9Y618 2525 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 LRRIQ4A6NIV6 560 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 BTBD18B2RXH4 712 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 LMNAP02545 664 aaKnown RBP16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 EDN1P05305 212 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 RFX1P22670 979 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 FSHRP23945 695 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 TXKP42681 527 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 GPC5P78333 572 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 TUSC3Q13454 348 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 DCLRE1AQ6PJP8 1040 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 MAML2Q8IZL2 1156 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 TMEM60Q9H2L4 133 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 PDZD7Q9H5P4 517 aa16.92■□□□□ 0.3
TRAPPC9-213ENST00000522504 SF3B1O75533 1304 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■■■ 124.8
TRAPPC9-213ENST00000522504 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 LARGE1O95461 756 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 SP9P0CG40 484 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 CDCA2Q69YH5 1023 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 ITFG1Q8TB96 612 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 PIK3R5Q8WYR1 880 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 RMDN1Q96DB5 314 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 FZD8Q9H461 694 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 SNTG2Q9NY99 539 aa16.91■□□□□ 0.3
TRAPPC9-213ENST00000522504 CACNA1IQ9P0X4 2223 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 MTCL1Q9Y4B5 1905 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 CCL16O15467 120 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 RECQL4O94761 1208 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 FOSBP53539 338 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 CREMQ03060 361 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 PSMD5Q16401 504 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 NOSTRINQ8IVI9 506 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 C1orf210Q8IVY1 113 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 KIAA2013Q8IYS2 634 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 FGF13Q92913 245 aa16.9■□□□□ 0.3
TRAPPC9-213ENST00000522504 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms