RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 P4HA2O15460 535 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 B4GALT5O43286 388 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 SFPQP23246 707 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CASP14P31944 242 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 FMO5P49326 533 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 ACLYP53396 1101 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CHMP4BP1P59074 171 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 DLG4P78352 724 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CLDN10P78369 228 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PTPN11Q06124 597 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 LRMPQ12912 555 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PRPF4BQ13523 1007 aaKnown RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PSMD6Q15008 389 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PCBP1Q15365 356 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 ATF7IP2Q5U623 682 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 TCERG1LQ5VWI1 586 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 GDF6Q6KF10 455 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 MPZL3Q6UWV2 235 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PPFIBP1Q86W92 1011 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 TMEM139Q8IV31 216 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 SLC43A3Q8NBI5 491 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CCDC51Q96ER9 411 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 FAM213AQ9BRX8 229 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 GCOM2Q9BZD3 368 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 EDEM3Q9BZQ6 932 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PLCB1Q9NQ66 1216 aa10.36□□□□□ -0.75
SHPRH-209ENST00000521977 PAK6Q9NQU5 681 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-209ENST00000521977 LRRIQ3A6PVS8 624 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 EPHB6O15197 1021 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 OGTO15294 1046 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CLDN3O15551 220 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 TSPAN1O60635 241 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 NOL4O94818 638 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 RPLP2P05387 115 aaKnown RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 TPM1P09493 284 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 DARSP14868 501 aaKnown RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 COL9A1P20849 921 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 GTF2H1P32780 548 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CRYBB1P53674 252 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 ADKP55263 362 aaKnown RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 POU5F1Q01860 360 aaKnown RBP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 PPP3CAQ08209 521 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHPRH-209ENST00000521977 EXOC3L4Q17RC7 722 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 KIZQ2M2Z5 673 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CBWD6Q4V339 395 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CBWD3Q5JTY5 395 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CBWD5Q5RIA9 395 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 EEF1DP3Q658K8 133 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 GBP6Q6ZN66 633 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 SERINC5Q86VE9 423 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 ZSCAN30Q86W11 494 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CCDC112Q8NEF3 446 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 LMO3Q8TAP4 145 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 WNT2BQ93097 391 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 UNC93B1Q9H1C4 597 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 CDT1Q9H211 546 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 GANQ9H2C0 597 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 PDZD7Q9H5P4 517 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 ABHD10Q9NUJ1 306 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 ANKFY1Q9P2R3 1169 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 FBXL5Q9UKA1 691 aa10.35□□□□□ -0.75
SHPRH-209ENST00000521977 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 STX10O60499 249 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 CSDE1O75534 798 aaKnown RBP10.34□□□□□ -0.75
SHPRH-209ENST00000521977 MCF2P10911 925 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 ARF4P18085 180 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-209ENST00000521977 TRIM21P19474 475 aaKnown RBP10.34□□□□□ -0.75
SHPRH-209ENST00000521977 SLC9A1P19634 815 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 EIF4BP23588 611 aaKnown RBP10.34□□□□□ -0.75
SHPRH-209ENST00000521977 PON1P27169 355 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 AXLP30530 894 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 HOXA11P31270 313 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-209ENST00000521977 KRT9P35527 623 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 ACOT2P49753 483 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 WNT7BP56706 349 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 ZBED6P86452 979 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 MGAT3Q09327 533 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 ITGA7Q13683 1181 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 SNX17Q15036 470 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 EPC2Q52LR7 807 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 C6orf132Q5T0Z8 1188 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 KLHDC7AQ5VTJ3 777 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 C15orf39Q6ZRI6 1047 aa10.34□□□□□ -0.75
SHPRH-209ENST00000521977 USP37Q86T82 979 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms