RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 DTNBO60941 627 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 ZMYND10O75800 440 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
PRKDC-204ENST00000521331 TUSC3Q13454 348 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 FAM187BQ17R55 369 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 GET4Q7L5D6 327 aaPredicted RBP16.48■□□□□ 0.23
PRKDC-204ENST00000521331 CDR2LQ86X02 465 aaPredicted RBP16.48■□□□□ 0.23
PRKDC-204ENST00000521331 GLYCTKQ8IVS8 523 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 ZBTB8OSQ8IWT0 167 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 ADSSL1Q8N142 457 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 MTMR9Q96QG7 549 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 TTPALQ9BTX7 342 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 TBC1D17Q9HA65 648 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
PRKDC-204ENST00000521331 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 ANHXE9PGG2 379 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 RPL17P18621 184 aaKnown RBP16.47■□□□□ 0.23
PRKDC-204ENST00000521331 TRIM29Q14134 588 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 CDCA2Q69YH5 1023 aaPredicted RBP16.47■□□□□ 0.23
PRKDC-204ENST00000521331 PHLDB3Q6NSJ2 640 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
PRKDC-204ENST00000521331 C2orf40Q9H1Z8 148 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 FZD8Q9H461 694 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 SLC2A4RGQ9NR83 387 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
PRKDC-204ENST00000521331 FBXW11Q9UKB1 542 aa16.47■□□□□ 0.23
PRKDC-204ENST00000521331 BTBD18B2RXH4 712 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 N4BP3O15049 544 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRKDC-204ENST00000521331 FSHRP23945 695 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
PRKDC-204ENST00000521331 HTR4Q13639 388 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 RTP2Q5QGT7 225 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 PDXDC1Q6P996 788 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 PRSS55Q6UWB4 352 aaPredicted RBP16.46■□□□□ 0.23
PRKDC-204ENST00000521331 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 GPR152Q8TDT2 470 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 PIK3R5Q8WYR1 880 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 TUFT1Q9NNX1 390 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 ARHGEF3Q9NR81 526 aa16.46■□□□□ 0.23
PRKDC-204ENST00000521331 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 CASTOR2A6NHX0 329 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 POTEMA6NI47 508 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 THP07101 528 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 HOXA9P31269 272 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 MAPK6Q16659 721 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 TMEM132AQ24JP5 1023 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 FAM171A1Q5VUB5 890 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 NSUN7Q8NE18 718 aaKnown RBP16.45■□□□□ 0.22
PRKDC-204ENST00000521331 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 CLSTN3Q9BQT9 956 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 PAAF1Q9BRP4 392 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 PDZD7Q9H5P4 517 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
PRKDC-204ENST00000521331 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 A0A087WWV3 80 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 WNT7AO00755 349 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 XYLBO75191 536 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 KIF4AO95239 1232 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 PSMD5Q16401 504 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 ME3Q16798 604 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 PPM1LQ5SGD2 360 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 DCLRE1AQ6PJP8 1040 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 POTEGQ6S5H5 508 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 ERMP1Q7Z2K6 904 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 GRASPQ7Z6J2 395 aaPredicted RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 CATSPER3Q86XQ3 398 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 ERMNQ8TAM6 284 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 LNX1Q8TBB1 728 aaPredicted RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 KCNG4Q8TDN1 519 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 SHDQ96IW2 340 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 POLR3CQ9BUI4 534 aaPredicted RBP16.44■□□□□ 0.22
PRKDC-204ENST00000521331 SNTG2Q9NY99 539 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 CACNG4Q9UBN1 327 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 CDH7Q9ULB5 785 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 VPS13AQ96RL7 3174 aa16.44■□□□□ 0.22
PRKDC-204ENST00000521331 ACKR2O00590 384 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 PTGESO14684 152 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 RECQL4O94761 1208 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 PRKCBP05771 671 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 C8AP07357 584 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 POU2F2P09086 479 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 ID4P47928 161 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 PPP2R5AQ15172 486 aa16.43■□□□□ 0.22
PRKDC-204ENST00000521331 ZC3H14Q6PJT7 736 aaKnown RBP16.43■□□□□ 0.22
PRKDC-204ENST00000521331 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms