RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 TRPS1Q9UHF7 1281 aa6.48□□□□□ -1.37
PTPN12-214ENST00000520947 EIF2B4Q9UI10 523 aaKnown RBP6.48□□□□□ -1.37
PTPN12-214ENST00000520947 ZBTB21Q9ULJ3 1066 aa6.48□□□□□ -1.37
PTPN12-214ENST00000520947 GRXCR1A8MXD5 290 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 SCAF4O95104 1147 aaKnown RBP6.47□□□□□ -1.37
PTPN12-214ENST00000520947 GASTP01350 101 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 APOBEC3AP31941 199 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-214ENST00000520947 KLF1Q13351 362 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-214ENST00000520947 FHL2Q14192 279 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 CLUL1Q15846 466 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 MUM1L1Q5H9M0 696 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 MFSD14BQ5SR56 506 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 PDZD4Q76G19 769 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-214ENST00000520947 ZNF276Q8N554 614 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 RNF169Q8NCN4 708 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 UHRF1Q96T88 793 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-214ENST00000520947 MRIQ9BWK5 157 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 GREM2Q9H772 168 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 PCDHGA2Q9Y5H1 932 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 TNKSO95271 1327 aa6.47□□□□□ -1.37
PTPN12-214ENST00000520947 MT-CO1P00395 513 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 ADH4P08319 380 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 MAKP20794 623 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 ECHS1P30084 290 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 CRHR1P34998 444 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 NEK2P51955 445 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 PER3P56645 1201 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 NOMO1Q15155 1222 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 CSRP2Q16527 193 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 Q6ZVL8 140 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 SLC25A43Q8WUT9 341 aaPredicted RBP6.46□□□□□ -1.38
PTPN12-214ENST00000520947 NDC1Q9BTX1 674 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 ADI1Q9BV57 179 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 GPRC5BQ9NZH0 403 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
PTPN12-214ENST00000520947 LEFTY2O00292 366 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 RECQL4O94761 1208 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 MYBL2P10244 700 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 GSPT1P15170 499 aaKnown RBP6.45□□□□□ -1.38
PTPN12-214ENST00000520947 MTNR1BP49286 362 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 HMGA2P52926 109 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 SLC5A3P53794 718 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 MCL1Q07820 350 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 PPP3CAQ08209 521 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 MALLQ13021 153 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 METTL24Q5JXM2 366 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 MBNL2Q5VZF2 373 aaKnown RBP6.45□□□□□ -1.38
PTPN12-214ENST00000520947 FAM180AQ6UWF9 173 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 GPRIN1Q7Z2K8 1008 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 TRMT2AQ8IZ69 625 aaKnown RBP6.45□□□□□ -1.38
PTPN12-214ENST00000520947 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 OR10H5Q8NGA6 315 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 SLC35B2Q8TB61 432 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 TFAP2CQ92754 450 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 ZNF768Q9H5H4 540 aaKnown RBP6.45□□□□□ -1.38
PTPN12-214ENST00000520947 LDAHQ9H6V9 325 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 RBM12Q9NTZ6 932 aaKnown RBP6.45□□□□□ -1.38
PTPN12-214ENST00000520947 TRPM5Q9NZQ8 1165 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 POGKQ9P215 609 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 DNM3Q9UQ16 869 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 GPR45Q9Y5Y3 372 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 EID1Q9Y6B2 187 aa6.45□□□□□ -1.38
PTPN12-214ENST00000520947 TBKBP1A7MCY6 615 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 B5MCH6 92 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 FZD9O00144 591 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 WNT10BO00744 389 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 PARNO95453 639 aaKnown RBP6.44□□□□□ -1.38
PTPN12-214ENST00000520947 PEX11BO96011 259 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 FLT3LGP49771 235 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 PTPN21Q16825 1174 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 ANO4Q32M45 955 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 EFCAB12Q6NXP0 572 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 PQLC1Q8N2U9 271 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 PPM1NQ8N819 430 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 STON2Q8WXE9 905 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 FUBP3Q96I24 572 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPN12-214ENST00000520947 KCNH6Q9H252 994 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 BCO1Q9HAY6 547 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 CLCA2Q9UQC9 943 aa6.44□□□□□ -1.38
PTPN12-214ENST00000520947 SHTN1A0MZ66 631 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 AHRRA9YTQ3 701 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 TRIM24O15164 1050 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 MARCH6O60337 910 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 NR4A1P22736 598 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 SREBF1P36956 1147 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 MCAMP43121 646 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 EPHB1P54762 984 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
PTPN12-214ENST00000520947 NHLH2Q02577 135 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 BMT2Q1RMZ1 405 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 FAM47AQ5JRC9 791 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 PGM2L1Q6PCE3 622 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 SYT12Q8IV01 421 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 C1orf162Q8NEQ5 155 aaPredicted RBP6.43□□□□□ -1.38
PTPN12-214ENST00000520947 LARP4BQ92615 738 aaKnown RBP6.43□□□□□ -1.38
PTPN12-214ENST00000520947 HAS1Q92839 578 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 FAXDC2Q96IV6 333 aa6.43□□□□□ -1.38
PTPN12-214ENST00000520947 PHACTR3Q96KR7 559 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms