RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 DPP7Q9UHL4 492 aa17.78■□□□□ 0.44
IGHV3-42-201ENST00000520410 TDRD15B5MCY1 1934 aaKnown RBP17.78■□□□□ 0.44
IGHV3-42-201ENST00000520410 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 INPPL1O15357 1258 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 TEX28O15482 410 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 HIP1RO75146 1068 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 THP07101 528 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 OSTNP61366 133 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 TUSC3Q13454 348 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 FAM187BQ17R55 369 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 USP41Q3LFD5 358 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 GLRA4Q5JXX5 417 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 EEF1DP3Q658K8 133 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 IGSF22Q8N9C0 903 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 KMT5AQ9NQR1 393 aa17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.77■□□□□ 0.44
IGHV3-42-201ENST00000520410 PHLPP2Q6ZVD8 1323 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 CD2BP2O95400 341 aaKnown RBP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 ASGR2P07307 311 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 GBP2P32456 591 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 PRPHP41219 470 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 MATR3P43243 847 aaKnown RBP eCLIP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 MCM2P49736 904 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 YARSP54577 528 aaKnown RBP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 ZNF568Q3ZCX4 644 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 DRC1Q96MC2 740 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 TCHPQ9BT92 498 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 CCDC113Q9H0I3 377 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 LIMD1Q9UGP4 676 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 SORCS3Q9UPU3 1222 aa17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-42-201ENST00000520410 CCDC195A0A1B0GUA6 201 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 EDN1P05305 212 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 DSG1Q02413 1049 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 CREMQ03060 361 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 FAM171A1Q5VUB5 890 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 PRSS55Q6UWB4 352 aaPredicted RBP17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 GPR149Q86SP6 731 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 GSTCDQ8NEC7 633 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 PAAF1Q9BRP4 392 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 RUSC1Q9BVN2 902 aa17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 ARIH1Q9Y4X5 557 aaPredicted RBP17.75■□□□□ 0.43
IGHV3-42-201ENST00000520410 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 KIF4AO95239 1232 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 NPTX2P47972 431 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 STRN3Q13033 797 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 IL17AQ16552 155 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 FBXL6Q8N531 539 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 CCDC94Q9BW85 323 aaPredicted RBP17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 MFSD1Q9H3U5 465 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 ZMYM2Q9UBW7 1377 aa17.74■□□□□ 0.43
IGHV3-42-201ENST00000520410 PTGESO14684 152 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 SLC16A4O15374 487 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 LILRB3O75022 631 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 RFPL2O75678 378 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 DHX8Q14562 1220 aaKnown RBP17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 PSMD5Q16401 504 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 NT5DC1Q5TFE4 455 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 KCNK18Q7Z418 384 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 SMOC2Q9H3U7 446 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 ANKFY1Q9P2R3 1169 aa17.73■□□□□ 0.43
IGHV3-42-201ENST00000520410 BRD1O95696 1058 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 LIN9Q5TKA1 542 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 C15orf39Q6ZRI6 1047 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 GET4Q7L5D6 327 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 UBALD2Q8IYN6 164 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 STAMQ92783 540 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 BICD1Q96G01 975 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 TTPALQ9BTX7 342 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 TARS2Q9BW92 718 aaKnown RBP17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 CXCL16Q9H2A7 254 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 RXFP1Q9HBX9 757 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 POLIQ9UNA4 740 aa17.72■□□□□ 0.43
IGHV3-42-201ENST00000520410 TGM5O43548 720 aa17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 B3GAT3O94766 335 aa17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 KRT18P05783 430 aaKnown RBP17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 SMTNP53814 917 aa17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 ELAVL2Q12926 359 aaKnown RBP17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 BMP8AQ7Z5Y6 402 aa17.71■□□□□ 0.43
IGHV3-42-201ENST00000520410 RNF168Q8IYW5 571 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms