RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 FGFR4P22455 802 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 GBP1P32455 592 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 DPP6P42658 865 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 ABCG1P45844 678 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 ATXN3P54252 364 aaPredicted RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 KCNC4Q03721 635 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 NCBP1Q09161 790 aaKnown RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 GRM4Q14833 912 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 IMMTQ16891 758 aaKnown RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 CEP55Q53EZ4 464 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 FUT10Q6P4F1 479 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 CYP2U1Q7Z449 544 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 HAUS6Q7Z4H7 955 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 RAB44Q7Z6P3 723 aaPredicted RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 ZNF410Q86VK4 478 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 SMAP1Q8IYB5 467 aaPredicted RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 COLGALT2Q8IYK4 626 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 LRRC71Q8N4P6 559 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 CHCHD4Q8N4Q1 142 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 EXOC4Q96A65 974 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 EVI5LQ96CN4 794 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 KIF2CQ99661 725 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 PLA2G2FQ9BZM2 168 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 LY9Q9HBG7 655 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 AGO4Q9HCK5 861 aaKnown RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 MARCH5Q9NX47 278 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 CHMP5Q9NZZ3 219 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 DNMT3BQ9UBC3 853 aaKnown RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 ADAM28Q9UKQ2 775 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 MAFBQ9Y5Q3 323 aaPredicted RBP5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 LAMA5O15230 3695 aa5.54□□□□□ -1.52
AC055854.1-202ENST00000519624 C2orf16Q68DN1 1984 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ITPR1Q14643 2758 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 A0A087WV48 116 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 SPAARA0A1B0GVQ0 90 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 DDX39AO00148 427 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 CHADO15335 359 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 CYTH3O43739 400 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ZNF862O60290 1169 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 EFEMP2O95967 443 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 LRG1P02750 347 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PRB1P04280 392 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 XRCC6P12956 609 aaKnown RBP eCLIP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ITGA4P13612 1032 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ELF1P32519 619 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ZNF76P36508 570 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 NUCB1Q02818 461 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ELAVL2Q12926 359 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 TRDNQ13061 729 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PSMD5Q16401 504 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ZNF746Q6NUN9 644 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 VITQ6UXI7 678 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 CLEC17AQ6ZS10 378 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 Q6ZS52 159 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 TRMT1LQ7Z2T5 733 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 KRT25Q7Z3Z0 450 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 MRPL10Q7Z7H8 261 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 MFSD6LQ8IWD5 586 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 SCUBE3Q8IX30 993 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ELMOD1Q8N336 334 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 LINC01465Q8N7H1 131 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PI4K2BQ8TCG2 481 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PIBF1Q8WXW3 757 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 SMARCD2Q92925 531 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ZNF668Q96K58 619 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ASB16Q96NS5 453 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 JPH2Q9BR39 696 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 LZTS2Q9BRK4 669 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 C22orf23Q9BZE7 217 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 GPR88Q9GZN0 384 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 RBM12Q9NTZ6 932 aaKnown RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 TBC1D22BQ9NU19 505 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 AGPAT5Q9NUQ2 364 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 DKK4Q9UBT3 224 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 EVLQ9UI08 416 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 CIZ1Q9ULV3 898 aaPredicted RBP5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PCDHA6Q9UN73 950 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 RAXQ9Y2V3 346 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PCDHB9Q9Y5E1 797 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PCDHA8Q9Y5H6 950 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 PCDHA10Q9Y5I2 948 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 STK24Q9Y6E0 443 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 BPTFQ12830 3046 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
AC055854.1-202ENST00000519624 ADAMTS20P59510 1910 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 KAT6AQ92794 2004 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 DSPP15924 2871 aaKnown RBP5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 A0A087WZ62 844 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 CCDC194A0A1B0GVG4 234 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 MYBPHLA2RUH7 354 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 ARL5CA6NH57 179 aa5.52□□□□□ -1.53
AC055854.1-202ENST00000519624 SLC38A8A6NNN8 435 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms