RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 ENTPD3O75355 529 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 CALCAP01258 141 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 PLS3P13797 630 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 CYP11B1P15538 503 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 FKBP1AP62942 108 aaKnown RBP17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 KRT17Q04695 432 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 SNX1Q13596 522 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 E2F5Q15329 346 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 HAUS6Q7Z4H7 955 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 CBWD2Q8IUF1 395 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 MGARPQ8TDB4 240 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 RIT2Q99578 217 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 ARHGEF10LQ9HCE6 1279 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 KCNH7Q9NS40 1196 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 CTNNAL1Q9UBT7 734 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 GGT7Q9UJ14 662 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 GTF3C4Q9UKN8 822 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 ZBTB21Q9ULJ3 1066 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 AGAP1Q9UPQ3 857 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 MRPL11Q9Y3B7 192 aaKnown RBP17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 AFF2P51816 1311 aa17.75■□□□□ 0.43
PCDHGA11-202ENST00000518882 SLC16A4O15374 487 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 DHX15O43143 795 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 TOM1O60784 492 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 SPP2Q13103 211 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 IL31RAQ8NI17 732 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 MAGEC3Q8TD91 643 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 RUNDC3BQ96NL0 473 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 HERPUD2Q9BSE4 406 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 STMN4Q9H169 189 aaPredicted RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 COL20A1Q9P218 1284 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 SNX3O60493 162 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 ATP6V1G2O95670 118 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 OAS1P00973 400 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 P4HBP07237 508 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 GSTA1P08263 222 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 MAPTP10636 758 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 GTF2BQ00403 316 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 TRAF1Q13077 416 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 NBPF9Q3BBW0 867 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 RHBDF2Q6PJF5 856 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 VSTM1Q6UX27 236 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 LDHDQ86WU2 507 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 HELQQ8TDG4 1101 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 ATG4AQ8WYN0 398 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 TRIM7Q9C029 511 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 DNAJC17Q9NVM6 304 aaKnown RBP17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
PCDHGA11-202ENST00000518882 ADSSP30520 456 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 PDE4CQ08493 712 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 ALCAMQ13740 583 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 NEDD9Q14511 834 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 TRMT10CQ7L0Y3 403 aaKnown RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 DDX1Q92499 740 aaKnown RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 ARHGEF2Q92974 986 aaKnown RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 CCDC127Q96BQ5 260 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 SAAL1Q96ER3 474 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 ROPN1BQ9BZX4 212 aaPredicted RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 ROPN1Q9HAT0 212 aaPredicted RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 MLXIPLQ9NP71 852 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 TMEM120BA0PK00 339 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 FSCN2O14926 492 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 GRIN3BO60391 1043 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 PEX3P56589 373 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 CDR2Q01850 454 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 SGO2Q562F6 1265 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 TEX2Q8IWB9 1127 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 CCDC63Q8NA47 563 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 NOD2Q9HC29 1040 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 FGFR1OP2Q9NVK5 253 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 WHRNQ9P202 907 aa17.73■□□□□ 0.43
PCDHGA11-202ENST00000518882 TCP11X1B4DZS4 312 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 TCP10L2B9ZVM9 353 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 PMM2O15305 246 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 UBOX5O94941 541 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 IVDP26440 423 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 MFAP3P55082 362 aa17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 TRIP13Q15645 432 aaPredicted RBP17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 SNRNP35Q16560 246 aaKnown RBP17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 TBC1D1Q86TI0 1168 aaPredicted RBP17.72■□□□□ 0.43
PCDHGA11-202ENST00000518882 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms