RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 MAP3K21Q5TCX8 1036 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 TAF2Q6P1X5 1199 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 CRELD2Q6UXH1 353 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 TOGARAM2Q6ZUX3 1019 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 TXLNBQ8N3L3 684 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 PCSK9Q8NBP7 692 aaKnown RBP16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 FBXL13Q8NEE6 735 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 CGRRF1Q99675 332 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 DEF6Q9H4E7 631 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
TRAPPC9-205ENST00000518839 USP27XA6NNY8 438 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 ABLIM1O14639 778 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 ELNP15502 786 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 FERP16591 822 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 TNNI1P19237 187 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 JAM2P57087 298 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 TRIM32Q13049 653 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 AMHR2Q16671 573 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 NYAP1Q6ZVC0 841 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 REXO1L1PQ8IX06 675 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 KLHDC9Q8NEP7 349 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 ADPGKQ9BRR6 497 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 MINDY3Q9H8M7 445 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 CPSF3Q9UKF6 684 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 ANK1P16157 1881 aa16.31■□□□□ 0.2
TRAPPC9-205ENST00000518839 MYADML2A6NDP7 307 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 FAM189A1O60320 539 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 CABYRO75952 493 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 IL18RAPO95256 599 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 PGK1P00558 417 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 TNNT1P13805 278 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 CCND3P30281 292 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 AXLP30530 894 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 PRKCIP41743 596 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 IRX5P78411 483 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 CAP1Q01518 475 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 SPA17Q15506 151 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 C15orf39Q6ZRI6 1047 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 SV2AQ7L0J3 742 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 SESTD1Q86VW0 696 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 WDR49Q8IV35 697 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 C16orf45Q96MC5 204 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 DESI2Q9BSY9 194 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 CDT1Q9H211 546 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 ADAMTS10Q9H324 1103 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 LUC7LQ9NQ29 371 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-205ENST00000518839 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 AKR1B10O60218 316 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 GPR32O75388 356 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 SOX5P35711 763 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 KLHL30Q0D2K2 578 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 ZACNQ401N2 412 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 RNF180Q86T96 592 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 RSPH3Q86UC2 560 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 GTF2IRD1Q9UHL9 959 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
TRAPPC9-205ENST00000518839 F8VZ95 297 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 TREHO43280 583 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 B4GALT5O43286 388 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 TSPAN1O60635 241 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 GFPT2O94808 682 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 LCA5LO95447 670 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 C4BPAP04003 597 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 CLTAP09496 248 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 DARSP14868 501 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 ARF4P18085 180 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 EIF4A3P38919 411 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 KIF11P52732 1056 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 MFAP3P55082 362 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 APBA1Q02410 837 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 PTPN11Q06124 597 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 DRAP1Q14919 205 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
TRAPPC9-205ENST00000518839 WDR44Q5JSH3 913 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms