RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 YWHABP31946 246 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 EVCP57679 992 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 NTHL1P78549 312 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 NPY5RQ15761 445 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 ZBTB41Q5SVQ8 909 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 OTUD6AQ7L8S5 288 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 NELL2Q99435 816 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 LXNQ9BS40 222 aa13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 TRIM6Q9C030 488 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 CDV3Q9UKY7 258 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-204ENST00000518723 MAP1BP46821 2468 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 XYLBO75191 536 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TADA2AO75478 443 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 C8AP07357 584 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TGM1P22735 817 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PDIA3P30101 505 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 MBTD1Q05BQ5 628 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TFDP1Q14186 410 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 HSP90AA2PQ14568 343 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 EPHA7Q15375 998 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PPM1LQ5SGD2 360 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PRSS55Q6UWB4 352 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 ITFG1Q8TB96 612 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 MTRQ99707 1265 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 RTKNQ9BST9 563 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 TTPALQ9BTX7 342 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 APOL6Q9BWW8 343 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 FAM126AQ9BYI3 521 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 XPNPEP1Q9NQW7 623 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 PRMT8Q9NR22 394 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 BMP2KQ9NSY1 1161 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
TRAPPC9-204ENST00000518723 USP24Q9UPU5 2620 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 CFAP47Q6ZTR5 3102 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 TBX3O15119 743 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 NCAM2O15394 837 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 RPS6KB1P23443 525 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 AKAP5P24588 427 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 INF2Q27J81 1249 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 XKR9Q5GH70 373 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 RTL10Q7L3V2 364 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 NPAS3Q8IXF0 933 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 SLKQ9H2G2 1235 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 ZSWIM4Q9H7M6 989 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
TRAPPC9-204ENST00000518723 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 CCL16O15467 120 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 ECI2O75521 394 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 DEXIO95424 95 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 CD72P21854 359 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 SSRP1Q08945 709 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 TUSC3Q13454 348 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 CAPSQ13938 189 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 PSMD5Q16401 504 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 RABGGTAQ92696 567 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 HAS1Q92839 578 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 KXD1Q9BQD3 176 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 RGL1Q9NZL6 768 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
TRAPPC9-204ENST00000518723 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ZBTB39O15060 712 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 B4GALT5O43286 388 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 KIF4AO95239 1232 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 NPTXRO95502 500 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ADRB1P08588 477 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 HSPA4P34932 840 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ARL2P36404 184 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 SPIRE1Q08AE8 756 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 FZD5Q13467 585 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms