RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 METAP2P50579 478 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CASP7P55210 303 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 PPP2R2BQ00005 443 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ABCB5Q2M3G0 1257 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 UVSSAQ2YD98 709 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 GORABQ5T7V8 394 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 KDM7AQ6ZMT4 941 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CPXCR1Q8N123 301 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 DEFB119Q8N690 84 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 C9orf43Q8TAL5 461 aaPredicted RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CSGALNACT1Q8TDX6 532 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 HDAC7Q8WUI4 952 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 RLN3Q8WXF3 142 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ING5Q8WYH8 240 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 TMEM169Q96HH4 297 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 C18orf12Q96KH6 178 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 APOL6Q9BWW8 343 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 GAREM1Q9H706 876 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 C8orf33Q9H7E9 229 aaPredicted RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ZDHHC7Q9NXF8 308 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 FTSJ1Q9UET6 329 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 FBXO40Q9UH90 709 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 SAP30BPQ9UHR5 308 aaKnown RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 PPP1R9AQ9ULJ8 1098 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ATXN7L1Q9ULK2 861 aaPredicted RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 FNDC3AQ9Y2H6 1198 aaKnown RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 PDCD11Q14690 1871 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 MYBPHLA2RUH7 354 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 LY6G6DO95868 133 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 GLUD1P00367 558 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 F2P00734 622 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 SSBP05455 408 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 FGFR1P11362 822 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 CDK4P11802 303 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 PEPDP12955 493 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 FCARP24071 287 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 ITGA3P26006 1051 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 CTHP32929 405 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 GUCY1A2P33402 732 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 ABL2P42684 1182 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 LEPRP48357 1165 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 SARSP49591 514 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 DOC2BQ14184 412 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 DMC1Q14565 340 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 KRT24Q2M2I5 525 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 USH1GQ495M9 461 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 MUM1L1Q5H9M0 696 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 SPDYCQ5MJ68 293 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 FBXO47Q5MNV8 452 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 HDGFL1Q5TGJ6 251 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 TSHZ1Q6ZSZ6 1077 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 TTC8Q8TAM2 541 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 MORC4Q8TE76 937 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 HTR3CQ8WXA8 447 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 MCRS1Q96EZ8 462 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 FOXC2Q99958 501 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 FTHL17Q9BXU8 183 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 ZDHHC5Q9C0B5 715 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 PHAXQ9H814 394 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 AGO3Q9H9G7 860 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 CABP5Q9NP86 173 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 SMC4Q9NTJ3 1288 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 BABAM1Q9NWV8 329 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 RBM19Q9Y4C8 960 aaKnown RBP3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 DAAM1Q9Y4D1 1078 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 IPPQ9Y573 584 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 PCDHGB2Q9Y5G2 931 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 LCTP09848 1927 aa3.81□□□□□ -1.8
SCARNA13-201ENST00000516672 A0A1W2PQD8 194 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 TTLL8A6PVC2 850 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 NEURL1BA8MQ27 555 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 KDM4EB2RXH2 506 aaPredicted RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CCER2I3L3R5 266 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 ARNTLO00327 626 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 ZNF263O14978 683 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 RNF40O75150 1001 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 REC8O95072 547 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CER1O95813 267 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 C1SP09871 688 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 TXNP10599 105 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 RARGP13631 454 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PSMC3P17980 439 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 P2RY2P41231 377 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 LSSP48449 732 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 RNASE9P60153 205 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 LMOD3Q0VAK6 560 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DNAJC3Q13217 504 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 SEPT2Q15019 361 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 SUZ12Q15022 739 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 WDR43Q15061 677 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DGKDQ16760 1214 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CCDC57Q2TAC2 916 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CWF19L2Q2TBE0 894 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 INAVAQ3KP66 663 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 TAF7LQ5H9L4 462 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 LMBRD2Q68DH5 695 aaPredicted RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 ANO7Q6IWH7 933 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms