RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 DENND2AQ9ULE3 1009 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 ITGB4P16144 1822 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 IGKV6D-21A0A0A0MT36 114 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM129A0AVI4 362 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CCDC151A5D8V7 595 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 A8MU10 97 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 PEX1O43933 1283 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CRLF1O75462 422 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 PPM1BO75688 479 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 EPHX1P07099 455 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 AOAHP28039 575 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 SESN2P58004 480 aaPredicted RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CWF19L2Q2TBE0 894 aaKnown RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 PRAMEF17Q5VTA0 474 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 DOK3Q7L591 496 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 KIAA0825Q8IV33 1275 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 MUC20Q8N307 709 aaPredicted RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF548Q8NEK5 533 aaPredicted RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CLUAP1Q96AJ1 413 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 HAPLN3Q96S86 360 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 LRRC3Q9BY71 257 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 RMI1Q9H9A7 625 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CYP26B1Q9NR63 512 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 DSEQ9UL01 958 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF214Q9UL59 606 aaPredicted RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPG7Q9UQ90 795 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 MTMR7Q9Y216 660 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 DMTF1Q9Y222 760 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 ATXN2Q99700 1313 aaKnown RBP0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 CKAP5Q14008 2032 aa0.06□□□□□ -2.4
RNU6-542P-201ENST00000516405 TCRBV5S4A2TA0A5A2 114 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 CCDC78A2IDD5 438 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 YY2O15391 372 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 MPPED1O15442 326 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 TREHO43280 583 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 HNRNPCP07910 306 aaKnown RBP eCLIP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 PTPN1P18031 435 aaKnown RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 ATP5F1P24539 256 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 HOXD9P28356 352 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 KIR2DL3P43628 341 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 GLIPR1P48060 266 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 MXRA7P84157 204 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 KCNAB2Q13303 367 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 TRIM25Q14258 630 aaKnown RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 TESK1Q15569 626 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 LPAL2Q16609 132 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 LRRFIP1Q32MZ4 808 aaKnown RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 SNAP47Q5SQN1 464 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 BTBD8Q5XKL5 378 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 ABLIM2Q6H8Q1 611 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 DENND5AQ6IQ26 1287 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 DRICH1Q6PGQ1 229 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 UNC5AQ6ZN44 842 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 PROSER2Q86WR7 435 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPATA2LQ8IUW3 424 aaPredicted RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 MAPKAPK5Q8IW41 473 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 OR10H5Q8NGA6 315 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 SSH3Q8TE77 659 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 RNF34Q969K3 372 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 REPS1Q96D71 796 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 HES6Q96HZ4 224 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 C5orf34Q96MH7 638 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 NOC4LQ9BVI4 516 aaKnown RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 CD244Q9BZW8 370 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 MRPL44Q9H9J2 332 aaKnown RBP0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 SDF2L1Q9HCN8 221 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 KLHL13Q9P2N7 655 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 KCNG2Q9UJ96 466 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 EMC9Q9Y3B6 208 aa0.05□□□□□ -2.4
RNU6-542P-201ENST00000516405 A0A1B0GUV1 79 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ADM5C9JUS6 153 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 FCHO1O14526 889 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 MEFVO15553 781 aaPredicted RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ORC4O43929 436 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZG16O60844 167 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 MAFO75444 373 aaPredicted RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 DNAJB5O75953 348 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 KRTAP1-4P0C5Y4 121 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 SERPINB4P48594 390 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ERVFC1-1P60608 527 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ERVK11-1P61568 191 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 CXADRP78310 365 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 POU5F1BQ06416 359 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 SRSF1Q07955 248 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 MRPL49Q13405 166 aaKnown RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 SF3B3Q15393 1217 aaKnown RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF239Q16600 458 aaKnown RBP0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPDYE7PQ495Y7 208 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 AGAP9Q5VTM2 703 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 GTF2IRD2BQ6EKJ0 949 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 KIAA1211LQ6NV74 962 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 FBXL19Q6PCT2 694 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 COLCA1Q6ZS62 124 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 GTF2IRD2Q86UP8 949 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 PIM3Q86V86 326 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 C8orf58Q8NAV2 365 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 MAPK1IP1LQ8NDC0 245 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 NEUROG1Q92886 237 aa0.04□□□□□ -2.4
RNU6-542P-201ENST00000516405 MED30Q96HR3 178 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms