RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 FOXK2Q01167 660 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 TUSC3Q13454 348 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 CDCA2Q69YH5 1023 aaPredicted RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 POTEGQ6S5H5 508 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 GTF3C6Q969F1 213 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
DDR1-278ENST00000515233 ZFP37Q9Y6Q3 630 aaPredicted RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 PTPRZ1P23471 2315 aaPredicted RBP16.64■□□□□ 0.25
DDR1-278ENST00000515233 SF3B1O75533 1304 aaKnown RBP eCLIP16.64■□□□□ 0.258e-6■■■■■ 107
DDR1-278ENST00000515233 A0A087WWV3 80 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 POTEMA6NI47 508 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 LRRIQ4A6NIV6 560 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 USO1O60763 962 aaKnown RBP16.63■□□□□ 0.25
DDR1-278ENST00000515233 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 GLYCTKQ8IVS8 523 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 RABGGTAQ92696 567 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 CLSTN3Q9BQT9 956 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 PAAF1Q9BRP4 392 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 GPRC5CQ9NQ84 441 aa16.63■□□□□ 0.25
DDR1-278ENST00000515233 STK25O00506 426 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 N4BP3O15049 544 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 LARGE1O95461 756 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 THP07101 528 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
DDR1-278ENST00000515233 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 RTP2Q5QGT7 225 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 ZBTB8OSQ8IWT0 167 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
DDR1-278ENST00000515233 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 NACC1Q96RE7 527 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
DDR1-278ENST00000515233 C2orf40Q9H1Z8 148 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 SLC2A4RGQ9NR83 387 aa16.62■□□□□ 0.25
DDR1-278ENST00000515233 PTGESO14684 152 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDR1-278ENST00000515233 HOXA9P31269 272 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 HTR4Q13639 388 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 TRIM29Q14134 588 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 NAB2Q15742 525 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
DDR1-278ENST00000515233 MAEAQ7L5Y9 396 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 ADSSL1Q8N142 457 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 GPR152Q8TDT2 470 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 FBXW11Q9UKB1 542 aa16.61■□□□□ 0.25
DDR1-278ENST00000515233 RIF1Q5UIP0 2472 aaKnown RBP16.6■□□□□ 0.25
DDR1-278ENST00000515233 TTLL13PA6NNM8 815 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 ACKR2O00590 384 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 MED24O75448 989 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 KIF4AO95239 1232 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 RPA1P27694 616 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
DDR1-278ENST00000515233 PRPF4BQ13523 1007 aaKnown RBP16.6■□□□□ 0.25
DDR1-278ENST00000515233 MAPK6Q16659 721 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 FAM171A1Q5VUB5 890 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 GET4Q7L5D6 327 aaPredicted RBP16.6■□□□□ 0.25
DDR1-278ENST00000515233 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 TBC1D17Q9HA65 648 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 CA14Q9ULX7 337 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 FAM186AA6NE01 2351 aa16.6■□□□□ 0.25
DDR1-278ENST00000515233 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 CASTOR2A6NHX0 329 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 JAK2O60674 1132 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 CYP11B2P19099 503 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 MUTP22033 750 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 RFX1P22670 979 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 FSHRP23945 695 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 NAMPTP43490 491 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 PSMD5Q16401 504 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 GRASPQ7Z6J2 395 aaPredicted RBP16.59■□□□□ 0.25
DDR1-278ENST00000515233 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 HASPINQ8TF76 798 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 BSNDQ8WZ55 320 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 CXCL16Q9H2A7 254 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 CDH7Q9ULB5 785 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 SIT1Q9Y3P8 196 aa16.59■□□□□ 0.25
DDR1-278ENST00000515233 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.24
DDR1-278ENST00000515233 RECQL4O94761 1208 aa16.58■□□□□ 0.24
DDR1-278ENST00000515233 POU2F2P09086 479 aa16.58■□□□□ 0.24
DDR1-278ENST00000515233 MCM7P33993 719 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms