RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 CROCCP2Q86T23 111 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 FITM2Q8N6M3 262 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 GBP5Q96PP8 586 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RUSC1Q9BVN2 902 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 GANQ9H2C0 597 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 MARCKSL1P49006 195 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 TBC1D10BQ4KMP7 808 aaPredicted RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 RASIP1Q5U651 963 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 BTNL9Q6UXG8 535 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 APBB1IPQ7Z5R6 666 aaPredicted RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 CHURC1Q8WUH1 139 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 STMN2Q93045 179 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 MCUR1Q96AQ8 359 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 ARHGEF26Q96DR7 871 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 L3MBTL3Q96JM7 780 aaPredicted RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RPS6KC1Q96S38 1066 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 CCDC77Q9BR77 488 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.31□□□□□ -0.76
VCAN-210ENST00000513960 HERC5Q9UII4 1024 aaKnown RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 DCTN4Q9UJW0 460 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 GAS7O60861 476 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 AKAP3O75969 853 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 ECEL1O95672 775 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 CHRNA5P30532 468 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 PTENP60484 403 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 AUHQ13825 339 aaKnown RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 QSER1Q2KHR3 1735 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 HS2ST1Q7LGA3 356 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 PIGWQ7Z7B1 504 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 ZC3H3Q8IXZ2 948 aaKnown RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 KCTD17Q8N5Z5 321 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RBM46Q8TBY0 533 aaKnown RBP10.31□□□□□ -0.76
VCAN-210ENST00000513960 C9orf72Q96LT7 481 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 RUNDC3BQ96NL0 473 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 SLC5A4Q9NY91 659 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 USH1CQ9Y6N9 552 aa10.31□□□□□ -0.76
VCAN-210ENST00000513960 CLRN2A0PK11 232 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 FAM187AA6NFU0 413 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 EML1O00423 815 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 CYP3A4P08684 503 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 LMNB1P20700 586 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ECE1P42892 770 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 UBXN2AP68543 259 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ZNF268Q14587 947 aaPredicted RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 IRF2BP2Q7Z5L9 587 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 EXOC3L1Q86VI1 746 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 SCYL3Q8IZE3 742 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 LRRC57Q8N9N7 239 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PPFIBP2Q8ND30 876 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 SUPT20HQ8NEM7 779 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 VAV3Q9UKW4 847 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 RASA4BC9J798 803 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PLSCR1O15162 318 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 RIPK2O43353 540 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 RASA4O43374 803 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 KLC1Q07866 573 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ZYXQ15942 572 aaKnown RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 RINT1Q6NUQ1 792 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ARHGEF18Q6ZSZ5 1173 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 VPS52Q8N1B4 723 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 CEP120Q8N960 986 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 DNAJC9Q8WXX5 260 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 KRT35Q92764 455 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PGM2Q96G03 612 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 DYDC2Q96IM9 177 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PWWP2AQ96N64 755 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 IKZF4Q9H2S9 585 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 CDC42EP4Q9H3Q1 356 aaKnown RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 TUFT1Q9NNX1 390 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 NKX1-2Q9UD57 310 aaPredicted RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 ZMYND8Q9ULU4 1186 aaPredicted RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 CORO1CQ9ULV4 474 aaPredicted RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 ALG6Q9Y672 507 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PIK3CDO00329 1044 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 SLC16A3O15427 465 aaKnown RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 CBX6O95503 412 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 EPHB2P29323 1055 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PSMC2P35998 433 aaKnown RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 JAG1P78504 1218 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 IL9RQ01113 521 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 PPP2R5EQ16537 467 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 EPM2AIP1Q7L775 607 aaPredicted RBP10.3□□□□□ -0.76
VCAN-210ENST00000513960 FAM186BQ8IYM0 893 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 TTC8Q8TAM2 541 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 LRRC8CQ8TDW0 803 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 ATP8B4Q8TF62 1192 aa10.3□□□□□ -0.76
VCAN-210ENST00000513960 CENPTQ96BT3 561 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms