RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TESK1Q15569 626 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 FKBP1CQ5VVH2 108 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 TUBA3EQ6PEY2 450 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 POMZP3Q6PJE2 187 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 CEP68Q76N32 757 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 DTX3Q8N9I9 347 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 TTLL11Q8NHH1 800 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 NPLOC4Q8TAT6 608 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 LARP4BQ92615 738 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 TRMT2BQ96GJ1 504 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 LRRC37BQ96QE4 947 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 PLEKHF1Q96S99 279 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 C1QTNF1Q9BXJ1 281 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 VEZTQ9HBM0 779 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 CD209Q9NNX6 404 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 GPRC5CQ9NQ84 441 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 CYP26B1Q9NR63 512 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 METTL5Q9NRN9 209 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 CPA4Q9UI42 421 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 EMC9Q9Y3B6 208 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 MGAMO43451 1857 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 CLSPNQ9HAW4 1339 aa4.66□□□□□ -1.66
PDLIM5-218ENST00000513341 COL4A1P02462 1669 aa4.65□□□□□ -1.66
PDLIM5-218ENST00000513341 COL2A1P02458 1487 aaPredicted RBP4.65□□□□□ -1.66
PDLIM5-218ENST00000513341 CLRN2A0PK11 232 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 H7BY64 318 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 PDHXO00330 501 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 CXCL11O14625 94 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 IGHMBP2P38935 993 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 RBM5P52756 815 aaKnown RBP eCLIP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 HDLBPQ00341 1268 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 PRKCZQ05513 592 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 MAP3K12Q12852 859 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 FASTKD5Q7L8L6 764 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 FAM83AQ86UY5 434 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 PROSER1Q86XN7 944 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 ULK2Q8IYT8 1036 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 CERS5Q8N5B7 392 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF483Q8TF39 744 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 ATXN2LQ8WWM7 1075 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 COA7Q96BR5 231 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 FGD4Q96M96 766 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 PLEKHG4BQ96PX9 1271 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 PARK7Q99497 189 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 C11orf49Q9H6J7 331 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 CWC25Q9NXE8 425 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 CHPF2Q9P2E5 772 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF70Q9UC06 446 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 OGDHLQ9ULD0 1010 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 ZMYND8Q9ULU4 1186 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 AKT3Q9Y243 479 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 COA3Q9Y2R0 106 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 SLC45A1Q9Y2W3 748 aa4.65□□□□□ -1.67
PDLIM5-218ENST00000513341 OTOFQ9HC10 1997 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 CHL1O00533 1208 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 SCAMP3O14828 347 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 PPP2R1AP30153 589 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 SMAD3P84022 425 aaKnown RBP4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 LMOD3Q0VAK6 560 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 CSRP2Q16527 193 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF804AQ7Z570 1209 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 TMEM87AQ8NBN3 555 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 FRS2Q8WU20 508 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 KLHL6Q8WZ60 621 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 TMEM169Q96HH4 297 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 MPHOSPH8Q99549 860 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 LBHD1Q9BQE6 289 aaPredicted RBP4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 GABRQQ9UN88 632 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 ZSWIM8A7E2V4 1837 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 MUC3AQ02505 3323 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 PIEZO1Q92508 2521 aa4.64□□□□□ -1.67
PDLIM5-218ENST00000513341 ANKRD34BA5PLL1 514 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 TNPO2O14787 897 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 DDX58O95786 925 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 RECKO95980 971 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 PEX11BO96011 259 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 HMGCRP04035 888 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 FOSL2P15408 326 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 DNAJA1P31689 397 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 KCNJ4P48050 445 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 RIPK4P57078 832 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 RAC3P60763 192 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 COL10A1Q03692 680 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 MOGSQ13724 837 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 COL9A2Q14055 689 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 CCDC142Q17RM4 750 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 STEAP3Q658P3 488 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 ZKSCAN4Q969J2 545 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 BACH2Q9BYV9 841 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 TMEM39BQ9GZU3 492 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 GREM2Q9H772 168 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 TDRD3Q9H7E2 651 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 MMRN2Q9H8L6 949 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 KIAA1522Q9P206 1035 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF112Q9UJU3 913 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms