RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 BIRC5O15392 142 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 PJA2O43164 708 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 OR6A2O95222 327 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 LUC7L3O95232 432 aaKnown RBP9.43□□□□□ -0.9
VCAN-208ENST00000512590 H2AFZP0C0S5 128 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 FBLN1P23142 703 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 SULT1E1P49888 294 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 DMWDQ09019 674 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 FNDC3BQ53EP0 1204 aaKnown RBP9.43□□□□□ -0.9
VCAN-208ENST00000512590 ACAD11Q709F0 780 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 H2AFVQ71UI9 128 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 MRPL48Q96GC5 212 aaKnown RBP9.43□□□□□ -0.9
VCAN-208ENST00000512590 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 PDZK1P1A8MUH7 402 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 ASS1P00966 412 aaKnown RBP9.43□□□□□ -0.9
VCAN-208ENST00000512590 FGFR1P11362 822 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 HALP42357 657 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 CCDC142Q17RM4 750 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 CAMK1DQ8IU85 385 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 CARNMT1Q8N4J0 409 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
VCAN-208ENST00000512590 ARMC7Q9H6L4 198 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 NEK6Q9HC98 313 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 STOML1Q9UBI4 398 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 ADAM21Q9UKJ8 722 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 PRR12Q9ULL5 1215 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 HCN4Q9Y3Q4 1203 aa9.43□□□□□ -0.9
VCAN-208ENST00000512590 ADGRF5Q8IZF2 1346 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 A0A0G2JLW4 131 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 BUB1O43683 1085 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 TDP2O95551 362 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 UBA1P22314 1058 aaKnown RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 RGS4P49798 205 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 IL9RQ01113 521 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 CYP24A1Q07973 514 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 SLFN5Q08AF3 891 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 TMX3Q96JJ7 454 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 PRIMPOLQ96LW4 560 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 GID8Q9NWU2 228 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 UBE4BO95155 1302 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 F8W810 466 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 LRRN2O75325 713 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 ZNF177Q13360 481 aaPredicted RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 GRAPQ13588 217 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 C11orf88Q6PI97 169 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 AGMOQ6ZNB7 445 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 MCPH1Q8NEM0 835 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 SHCBP1Q8NEM2 672 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 OMDQ99983 421 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 APOL5Q9BWW9 433 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 TDRD3Q9H7E2 651 aaKnown RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 ARHGEF3Q9NR81 526 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 SLC11A2P49281 568 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 CCNYL1Q8N7R7 359 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 BRINP2Q9C0B6 783 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 RBM7Q9Y580 266 aaKnown RBP9.42□□□□□ -0.9
VCAN-208ENST00000512590 HEY1Q9Y5J3 304 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 B2RBV5 119 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
VCAN-208ENST00000512590 PDE1AP54750 535 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 TPI1P60174 286 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 CATSPER3Q86XQ3 398 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
VCAN-208ENST00000512590 GUCY2FP51841 1108 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 COPS2P61201 443 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 INAVAQ3KP66 663 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 IZUMO3Q5VZ72 239 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 CHSY1Q86X52 802 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 COLGALT2Q8IYK4 626 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
VCAN-208ENST00000512590 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
VCAN-208ENST00000512590 ELAC2Q9BQ52 826 aaKnown RBP9.41□□□□□ -0.9
VCAN-208ENST00000512590 CINPQ9BW66 212 aaPredicted RBP9.41□□□□□ -0.9
VCAN-208ENST00000512590 BBS2Q9BXC9 721 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 SPZ1Q9BXG8 430 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 HMGCS2P54868 508 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 PWP1Q13610 501 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 MORF4L2Q15014 288 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 LRRC24Q50LG9 513 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 SYT10Q6XYQ8 523 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 PRPF18Q99633 342 aaKnown RBP9.41□□□□□ -0.9
VCAN-208ENST00000512590 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 VPS51Q9UID3 782 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
VCAN-208ENST00000512590 AFPP02771 609 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms