RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF500O60304 480 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP38-203ENST00000511739 STAG3L1P0CL83 205 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 AMPD2Q01433 879 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TP53BP2Q13625 1128 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 FASTKD1Q53R41 847 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 CYP4A22Q5TCH4 519 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 HS6ST3Q8IZP7 471 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 C10orf53Q8N6V4 93 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 XXYLT1Q8NBI6 393 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 COG1Q8WTW3 980 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PIGBQ92521 554 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TMEM169Q96HH4 297 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 FAM96AQ9H5X1 160 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PLEKHA5Q9HAU0 1116 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 POLR3EQ9NVU0 708 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 COPG1Q9Y678 874 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 RIMS1Q86UR5 1692 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 RNF103-CHMP3A0A140T963 221 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 SLC16A4O15374 487 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ORC4O43929 436 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 MCF2P10911 925 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ACADMP11310 421 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 GFAPP14136 432 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 HOXA7P31268 230 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 CASP14P31944 242 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ALDH7A1P49419 539 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 RCAN1P53805 252 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 DHX9Q08211 1270 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 ZNF658Q5TYW1 1059 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 TBC1D1Q86TI0 1168 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 RHOT2Q8IXI1 618 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 SAYSD1Q9NPB0 183 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 RPRD1BQ9NQG5 326 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 CNOT8Q9UFF9 292 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 RCOR1Q9UKL0 485 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ARHGEF9O43307 516 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 FTCDO95954 541 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 SERPING1P05155 500 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 BRD2P25440 801 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 LIFRP42702 1097 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 NCKAP1LP55160 1127 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 MDM2Q00987 491 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 DMC1Q14565 340 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 FBXW10Q5XX13 1052 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 ZNF438Q7Z4V0 828 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 POLR3FQ9H1D9 316 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 INTUQ9ULD6 942 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 UBR1Q8IWV7 1749 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 FAM47DPA6NHR8 397 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TTLL13PA6NNM8 815 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 TLR2O60603 784 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 CELF2O95319 508 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 FCGRTP55899 365 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 NR5A1Q13285 461 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PID1Q7Z2X4 250 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 KDELC2Q7Z4H8 507 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 DCP1BQ8IZD4 617 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 LCORLQ8N3X6 602 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 SCUBE2Q9NQ36 999 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 PPARGC1AQ9UBK2 798 aaKnown RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.11□□□□□ -1.43
USP38-203ENST00000511739 PALLDQ8WX93 1383 aa6.11□□□□□ -1.43
USP38-203ENST00000511739 STXBP3O00186 592 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ZW10O43264 779 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PPP6R2O75170 966 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ZFXP17010 805 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 SLC9A1P19634 815 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 BCAR1P56945 870 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 TPI1P60174 286 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SCRN1Q12765 414 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 TWF1Q12792 350 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PKP1Q13835 747 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 KCNB1Q14721 858 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 FAM102AQ5T9C2 384 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 APOA5Q6Q788 366 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.1□□□□□ -1.43
USP38-203ENST00000511739 ZNF589Q86UQ0 364 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 CDKL3Q8IVW4 592 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 TTLL11Q8NHH1 800 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SKA1Q96BD8 255 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 MED4Q9NPJ6 270 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 HPS4Q9NQG7 708 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 MAD2L2Q9UI95 211 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PCDHA7Q9UN72 937 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PKP3Q9Y446 797 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 CLIC4Q9Y696 253 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 C2CD2LO14523 706 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PRKAB2O43741 272 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 CAND2O75155 1236 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 PLCG1P19174 1290 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 HMGCS2P54868 508 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 DR1Q01658 176 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 E2F5Q15329 346 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 NUDT12Q9BQG2 462 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms